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Protein Overview: DEGP8_ARATH

General Information:
Name(s) found: DEGP8_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Protease Do-like 8, chloroplastic OS=Arabidopsis thaliana GN=DEGP8 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 448 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    thylakoid lumen [IDA]
    chloroplast thylakoid lumen [IDA]
    thylakoid [IDA]
    Biological Process: proteolysis [IDA][ISS]
    photosystem II repair [IMP]
    Molecular Function: serine-type peptidase activity [ISS]
    peptidase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVIASFCSK PNENEFVGRR QLLSSVCSKI SQGDVVSHPP VSSVKVTQDW KSNLHELAVK  60
   61 SVPSTTRRIL LTSLFMNLCF NPSRYLSALA LGDPSVATVE DVSPTVFPAG PLFPTEGRIV 120
  121 QLFEKNTYSV VNIFDVTLRP QLKMTGVVEI PEGNGSGVVW DGQGYIVTNY HVIGNALSRN 180
  181 PSPGDVVGRV NILASDGVQK NFEGKLVGAD RAKDLAVLKV DAPETLLKPI KVGQSNSLKV 240
  241 GQQCLAIGNP FGFDHTLTVG VISGLNRDIF SQTGVTIGGG IQTDAAINPG NSGGPLLDSK 300
  301 GNLIGINTAI FTQTGTSAGV GFAIPSSTVL KIVPQLIQFS KVLRAGINIE LAPDPVANQL 360
  361 NVRNGALVLQ VPGKSLAEKA GLHPTSRGFA GNIVLGDIIV AVDDKPVKNK AELMKILDEY 420
  421 SVGDKVTLKI KRGNEDLELK ISLEEKSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..100] deduced N/A No confident structure predictions are available.
    2 View Details [101..448] PSI-BLAST 65.522879 Protease Do (DegP, HtrA), C-terminal domains; Protease Do (DegP, HtrA), catalytic domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle