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Protein Overview: A494_ARATH

General Information:
Name(s) found: A494_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|4567274|gb|AAD23687.1| cysteine proteinase [Arabidopsis thaliana] [NCBI NR]
  • gi|25289997|pir||B84601 cysteine proteinase (EC 3.4.22.-) [similarity] - Arabidopsis thaliana [NCBI NR]
  • gi|18399697|ref|NP_565512.1| cysteine proteinase A494, putative / thiol protease, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|12643282|sp|P43295.2|A494_ARATH RecName: Full=Probable cysteine proteinase A494; Flags: Precursor [NCBI NR]
  • gi|116325924|gb|ABJ98563.1| At2g21430 [Arabidopsis thaliana] [NCBI NR]
  • Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2 [Swiss-Prot]
  • (P43295) Probable cysteine proteinase A494 precursor (EC 3.4.22.-) [athaliana3702.FASTAC.txt]
  • cysteine proteinase [Arabidopsis thaliana]gi|18399697|ref|NP_565512.1| cysteine proteinase A494, putative / thiol protease, putative [Arabidopsis thaliana]gi|25289997|pir||B84601 cysteine proteinase (EC 3.4.22.-) [similarity] - Arabidopsis thalianagi|1 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Probable cysteine proteinase A494 precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | cysteine proteinase A494, putative / thiol protease, putative | chr2:9179044-9180381 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Probable cysteine proteinase A494 precursor [nr-271106-contam.fasta]
  • At2g21430 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • cysteine proteinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • cysteine-type endopeptidase/ cysteine-type peptidase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Papain family cysteine protease | chr2:9171964-9173301 REVERSE LENGTH=361 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 361 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: proteolysis [IEA][ISS]
    Molecular Function: cysteine-type endopeptidase activity [IEA]
    cysteine-type peptidase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYHLRVLFS VSLIFVFVSV SVCGDEDVLI RQVVDETEPK VLSSEDHFTL FKKKFGKVYG  60
   61 SIEEHYYRFS VFKANLLRAM RHQKMDPSAR HGVTQFSDLT RSEFRRKHLG VKGGFKLPKD 120
  121 ANQAPILPTQ NLPEEFDWRD RGAVTPVKNQ GSCGSCWSFS TTGALEGAHF LATGKLVSLS 180
  181 EQQLVDCDHE CDPEEEGSCD SGCNGGLMNS AFEYTLKTGG LMREKDYPYT GTDGGSCKLD 240
  241 RSKIVASVSN FSVVSINEDQ IAANLIKNGP LAVAINAAYM QTYIGGVSCP YICSRRLNHG 300
  301 VLLVGYGSAG FSQARLKEKP YWIIKNSWGE SWGENGFYKI CKGRNICGVD SLVSTVAATT 360
  361 S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..361] PSI-BLAST 77.522879 (Pro)cathepsin L

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  4.90619850296986 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  4.64381885397949 bayes_pls_golite062009
  • endopeptidase activity
    		•  3.75054525912786 bayes_pls_golite062009
  • hydrolase activity
    		•  3.74079711298952 bayes_pls_golite062009
  • cysteine-type peptidase activity
    		•  2.71117522993364 bayes_pls_golite062009
  • cysteine-type endopeptidase activity
    		•  1.95802900199539 bayes_pls_golite062009
  • binding
    		•  1.49113376575534 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  1.12653729823589 bayes_pls_golite062009
  • catalytic activity
    		•  1.05972260874031 bayes_pls_golite062009
  • protein binding
    		•  0.874003454509364 bayes_pls_golite062009
  • small conjugating protein-specific protease activity
    		•  0.649171767629235 bayes_pls_golite062009
  • thiolester hydrolase activity
    		•  0.59115205419466 bayes_pls_golite062009
  • kininogen binding
    		•  0.41283715939055 bayes_pls_golite062009
  • signal transducer activity
    		•  0.26868506520228 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.26868506520228 bayes_pls_golite062009
  • structural molecule activity
    		•  0.102555314244558 bayes_pls_golite062009
  • tubulin binding
    		•  0.0482209771629902 bayes_pls_golite062009
  • ubiquitin-specific protease activity
    		•  0.0101379718864654 bayes_pls_golite062009
  • microtubule binding
    		•  0.00635493133568055 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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