YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: PBPF_BACSU

General Information:
Name(s) found: PBPF_BACSU [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
SHOW ALL
  • Penicillin-binding protein 1F OS=Bacillus subtilis GN=pbpF PE=2 SV=1 [Swiss-Prot]
    • Organism: Bacillus subtilis
    Length: 714 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKIKKKKLF IPIIILVLTA FLALIGYISI IFLGHYVIDE KKLILHASSK IVDQNGDEVA  60
   61 SLYTENREPV SINEIPKQVR EAFIAVEDKR FYEHHGIDAK SVGRAVYRDI LAGGKVEGGT 120
  121 TITQQLAKNI FLTHDKTFLR KTKEVIIAIN LERDYSKDKL LEMYLNQLYF GHGVYGIQAA 180
  181 SHYYFNKEVK DLTVSEGAVL AAIPKAPSTY SPILHPDKNK ERRDTILGMM NDQGYISAKE 240
  241 AVTAQGRTLG LHVKKQSETP WFDSYIDLVI KEAEDKYSIS GEQLLQGGYT IKVPLDSKLQ 300
  301 KTAYQVMKEG SYYPGTDQNA EGSAVFINNK TGGVEAAIGG RDYTSKGYNR VTAVRQPGST 360
  361 FKPLAVYGPA MQEKKFKPYS LLKDELQSYG DYTPKNYDSR YEGEVTMSDA ITYSKNAPAV 420
  421 WTLNEIGVET GKSYLKANGI DIPDEGLALA LGGLEKGVSP LQLAGAFHTF AANGTYTEPF 480
  481 FISSIIDEDG ETIADHKEEG KRVFSKQTSW NMTRMLQQVV KKGTATSGTY HGDLAGKTGS 540
  541 TSYTGVSGAT KDAWFAGYTP KITGAVWMGY DKTDQNHYLK AGSSYPTRLF KDILTQAGET 600
  601 GHVFTKPKNV KELESPIELK PVKTLTADYT FKAAGLFTIE LKWDAQEDDR AVYRIYVNKD 660
  661 GEETLLDSVE GKGSYEIPYA NLFSGASYKI VPYNTQTKRE GEGTDYVQPK LFSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..714] PSI-BLAST 115.0 No description for 2oluA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • serine-type D-Ala-D-Ala carboxypeptidase activity
    		•  3.37745387761459 bayes_pls_golite062009
  • penicillin binding
    		•  3.16077730467133 bayes_pls_golite062009
  • serine-type carboxypeptidase activity
    		•  3.02516915958448 bayes_pls_golite062009
  • serine-type exopeptidase activity
    		•  2.98959517344587 bayes_pls_golite062009
  • carboxypeptidase activity
    		•  2.34154596924818 bayes_pls_golite062009
  • catalytic activity
    		•  2.2253600206851 bayes_pls_golite062009
  • drug binding
    		•  2.00354593744547 bayes_pls_golite062009
  • exopeptidase activity
    		•  1.66768404710194 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  1.16054683174437 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  1.07226857049823 bayes_pls_golite062009
  • peptidase activity
    		•  0.0621279448114327 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle