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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PBPF_BACSU
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKIKKKKLF IPIIILVLTA FLALIGYISI IFLGHYVIDE KKLILHASSK IVDQNGDEVA  60
   61 SLYTENREPV SINEIPKQVR EAFIAVEDKR FYEHHGIDAK SVGRAVYRDI LAGGKVEGGT 120
  121 TITQQLAKNI FLTHDKTFLR KTKEVIIAIN LERDYSKDKL LEMYLNQLYF GHGVYGIQAA 180
  181 SHYYFNKEVK DLTVSEGAVL AAIPKAPSTY SPILHPDKNK ERRDTILGMM NDQGYISAKE 240
  241 AVTAQGRTLG LHVKKQSETP WFDSYIDLVI KEAEDKYSIS GEQLLQGGYT IKVPLDSKLQ 300
  301 KTAYQVMKEG SYYPGTDQNA EGSAVFINNK TGGVEAAIGG RDYTSKGYNR VTAVRQPGST 360
  361 FKPLAVYGPA MQEKKFKPYS LLKDELQSYG DYTPKNYDSR YEGEVTMSDA ITYSKNAPAV 420
  421 WTLNEIGVET GKSYLKANGI DIPDEGLALA LGGLEKGVSP LQLAGAFHTF AANGTYTEPF 480
  481 FISSIIDEDG ETIADHKEEG KRVFSKQTSW NMTRMLQQVV KKGTATSGTY HGDLAGKTGS 540
  541 TSYTGVSGAT KDAWFAGYTP KITGAVWMGY DKTDQNHYLK AGSSYPTRLF KDILTQAGET 600
  601 GHVFTKPKNV KELESPIELK PVKTLTADYT FKAAGLFTIE LKWDAQEDDR AVYRIYVNKD 660
  661 GEETLLDSVE GKGSYEIPYA NLFSGASYKI VPYNTQTKRE GEGTDYVQPK LFSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle