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Protein Overview: CE36094

General Information:
Name(s) found: CE36094 [WormBase]
Description(s) found:
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  • WBGene00015346 Uncharacterized GTP-binding protein C02F5.3 status:Confirmed UniProt:P34280 protein_id:CCD62627.1 [WormBase]
  • gi|71981008|ref|NP_498808.2| hypothetical protein C02F5.3 [Caenorhabditis elegans] [NCBI NR]
  • gi|47117846|sp|P34280.2|YKK3_CAEEL RecName: Full=Uncharacterized GTP-binding protein C02F5.3 [NCBI NR]
  • gi|38638838|gb|AAR25659.1| Hypothetical protein C02F5.3 [Caenorhabditis elegans] [NCBI NR]
  • Uncharacterized GTP-binding protein C02F5.3 OS=Caenorhabditis elegans GN=C02F5.3 PE=3 SV=2 [Swiss-Prot]
  • [wormpep115.fasta]
  • Hypothetical protein C02F5.3 [Caenorhabditis elegans]gi|47117846|sp|P34280|YKK3_CAEEL Hypothetical GTP-binding protein C02F5.3 in chromosome III [nrdb_11152004_Chlamydomonas]
  • CE36094 WBGene00015346 GTP-binding protein status:Confirmed SW:P34280 protein_id:AAR25659.1 [wormpep150.fasta]
  • 36094 WBGene00015346 GTP-binding protein status:Confirmed SW:P34280 protein_id:AAR25659.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • GTP-binding protein status:Confirmed SW:P34280 protein_id:AAA27918.1 [wormpep115.fasta.reversed]
  • CE36094 WBGene00015346 GTP-binding protein status:Confirmed UniProt:YKK3_CAEEL protein_id:AAR25659.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE36094 WBGene00015346 GTP-binding protein status:Confirmed UniProt:YKK3_CAEEL protein_id:AAR25659.1| [wormORF-contam.fasta]
  • Uncharacterized GTP-binding protein C02F5.3 [nr-271106-contam.fasta]
  • C02F5.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C02F5.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE36094 WBGene00015346 GTP-binding protein status:Confirmed UniProt:P34280 protein_id:AAR25659.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE36094 WBGene00015346 GTP-binding protein status:Confirmed UniProt:P34280 protein_id:CCD62627.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE36094 WBGene00015346 status:Confirmed UniProt:P34280 protein_id:CCD62627.1 Uncharacterized GTP-binding protein C02F5.3 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 366 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: ferrous iron transport [IEALink to PubMed article]
    Molecular Function: GTP binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGILEKIAEI EHEISRTQKN KATEYHLGLL KAKLAKYRQQ LLEPTGKGGA KGEGFDVMKS  60
   61 GDARVAMVGF PSVGKSTLLS SMTSTHSEAA GYEFTTLTCI PGVISYNGAN IQLLDLPGII 120
  121 EGASQGKGRG RQVISVAKTA DLILMMLDAG KSDQQKMLLE RELEAVGIRL NKKPPNIYVK 180
  181 QKKVGGVKFT NTVPLTHCNE KLIMTVLHEY KIFNADVIFR EDCTVDEFID VIQGNRVYMT 240
  241 CLYVYNKVDQ ISIEEIDRLA RMPHHVVISC EMNLNMDYLL EKMWEYLALV RVYTKKPGNA 300
  301 PDLGPEDGII LRGGATIEHC CHALHRSIAA QLRYAIVWGT STKFSPQRVG LHHKLDHEDV 360
  361 IQIVKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..62] PSI-BLAST 41.69897 Obg GTP-binding protein N-terminal domain; Obg GTP-binding protein C-terminal domain
    2 View Details [63..366] PSI-BLAST 58.0 YchF GTP-binding protein N-terminal domain; YchF GTP-binding protein, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  2.64537357529343 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.09956015274464 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.09345198747025 bayes_pls_golite062009
  • guanyl nucleotide binding
    		•  1.89320355239381 bayes_pls_golite062009
  • guanyl ribonucleotide binding
    		•  1.88721318481223 bayes_pls_golite062009
  • GTP binding
    		•  1.87900088157196 bayes_pls_golite062009
  • DNA binding
    		•  1.87765278833074 bayes_pls_golite062009
  • GTPase activity
    		•  1.23010905798386 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  1.21658213854831 bayes_pls_golite062009
  • ribonucleotide binding
    		•  1.21652144153182 bayes_pls_golite062009
  • purine nucleotide binding
    		•  1.21571071905795 bayes_pls_golite062009
  • nucleotide binding
    		•  1.20347573865566 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • motor activity
    		•  0.926612891775441 bayes_pls_golite062009
  • transcription factor activity
    		•  0.682439846757997 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.498311726132348 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.219555040684154 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.198256709027213 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.197994873032963 bayes_pls_golite062009
  • protein binding
    		•  0.170837278876362 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.089234257580272 bayes_pls_golite062009
  • helicase activity
    		•  0.0775311459068899 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle