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Protein Overview: CE35700

General Information:
Name(s) found: CE35700 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00013857 locus:orc-5 status:Confirmed UniProt:Q23249 protein_id:CAA94386.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 396 amino acids

    Gene Ontology:
    Cellular Component: origin recognition complex [IEALink to PubMed article]
    nucleus [IEALink to PubMed article]
    Biological Process: hermaphrodite genitalia development [IMPLink to PubMed articleLink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    morphogenesis of an epithelium [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    Molecular Function: nucleotide binding [IEALink to PubMed article]
    nucleoside-triphosphatase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENCEIRRLK MLLFNNSRII SHVHIFGEDG SGRSEIVRQL LRKPENDWVC VLGDFLYADG  60
   61 SLKLLFDSLA SSLGFKTRGD RAENFCDNLY KYVQWPDETN RKIVIFLDNA QAITDYPPVP 120
  121 LQCLFDSYKA IQEITIRFVT SAPSCLNQYH INLSHLPVVE FHIPAPSVET TKVLISRANP 180
  181 KINAQFLHVA CQSLFMACKS PNILLSIISD AWLMYDERRT GDKFDSTLAK ECLNRSSGEK 240
  241 LGNVVGENLA KENENSFDAM PLAMRYLLIA AYCASNNPHQ SDCRFFVKNH GREKRSEKKE 300
  301 LRLEENRLAK DLGPKAADLQ RIICIYETLL KINESTITGF DLKSVIASLD SMGLVSVTNR 360
  361 SNLDIPKIKC LISLESALKI SRSLNLELRN YLEHAT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..396] PSI-BLAST 42.522879 EDTA treated

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.05253348982328 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  1.81138802583782 bayes_pls_golite062009
  • helicase activity
    		•  1.70242731830224 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.49633029954726 bayes_pls_golite062009
  • DNA-dependent ATPase activity
    		•  1.2155186842031 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
    		•  1.19311444180077 bayes_pls_golite062009
  • ATP-dependent helicase activity
    		•  1.19311444180077 bayes_pls_golite062009
  • protein-DNA loading ATPase activity
    		•  1.00391607739958 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • DNA binding
    		•  0.967303417236485 bayes_pls_golite062009
  • DNA clamp loader activity
    		•  0.91290128595235 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  0.782430219754236 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.748437190903548 bayes_pls_golite062009
  • DNA helicase activity
    		•  0.72881469450553 bayes_pls_golite062009
  • double-stranded DNA binding
    		•  0.6071273686445 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
    		•  0.5886142102548 bayes_pls_golite062009
  • DNA replication origin binding
    		•  0.505079230166616 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  0.367559137329714 bayes_pls_golite062009
  • protein binding
    		•  0.193768631623192 bayes_pls_golite062009
  • nucleotide binding
    		•  0.114848452385726 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.10713474095071 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.0916519414118148 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.0915913646217636 bayes_pls_golite062009
  • DNA polymerase activity
    		•  4.95561462330096E-4 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle