YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: pdfr-1

General Information:
Name(s) found: pdfr-1 / CE30860 [WormBase]
Description(s) found:
Found 24 descriptions.
SHOW ALL
  • WBGene00015735 locus:pdfr-1 Calcitonin receptor-like protein 1 status:Confirmed UniProt:Q09460 protein_id:CCD64378.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 546 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    positive regulation of adenylate cyclase activity [ISSLink to PubMed article]
    activation of adenylate cyclase activity by G-protein signaling pathway [ISSLink to PubMed article]
    cellular calcium ion homeostasis [ISSLink to PubMed article]
    Molecular Function: G-protein coupled receptor activity [IEALink to PubMed article]
    calcitonin receptor activity [ISSLink to PubMed articleLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADATSPFNV SILDNSTKLS EMVESGWNVL ASTSVQAFNE AMDVLEESYP LCKKMLDHNN  60
   61 LFPERDPNDT RIWCNATYDT VLCWPPTPAN SSVTLQCPHM KGLDPNKNIT KDCHVSGVWS 120
  121 GRNAGEMGPT LPGWTNFTMC YTDEVIYIMQ NLNNESLTIA QEVARNARKL EFVGLGLSLV 180
  181 SLILAISIFS YFRRLRVFRN LLHLHLMIAM LMVVILRLVL YIDLIFTGEN GPHTNSAEGK 240
  241 TINTMPIVCE GMFFFLEYFK TVTFCWMFLE GIYLNNQIVF GFFNSEPKLL PYFIAGYGIP 300
  301 LVHTMLWLLV VLIKKDFKVE RCLGSYYLEP EFWILDGPRM AELVINLFFI CNVIRVLYSK 360
  361 VRESNNTSEA GLKKSVKAAM MLLPLLGVPN IMQTIPFAPT RDNIMVFAVW TYTASFTYMY 420
  421 QGLMVASIYC FTNKEVNHVL KTFYARYRLL HKSQNELRRG SRSVASHYAA KNGTANASAP 480
  481 QTNNADEFGK LSPFPSRSKK GSDDSTTKLM KDAVMEEEKN ANNNGYGSAG EMTPLREGSN 540
  541 RSTKSP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..86] PSI-BLAST 19.522879 Frizzled 8 (FZ8)
    2 View Details [87..139] FFAS03 1.84 3D NMR structure of the first extracellular domain of CRFR-2beta, a type B1 G-protein coupled receptor
    3 View Details [140..546] PSI-BLAST 49.69897 Rhodopsin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transmembrane receptor activity
    		•  4.38708793497137 bayes_pls_golite062009
  • receptor activity
    		•  4.1046853496316 bayes_pls_golite062009
  • signal transducer activity
    		•  3.17034085692897 bayes_pls_golite062009
  • molecular transducer activity
    		•  3.17034085692897 bayes_pls_golite062009
  • Wnt receptor activity
    		•  2.95244120669902 bayes_pls_golite062009
  • binding
    		•  2.18217693324765 bayes_pls_golite062009
  • protein binding
    		•  2.15165760199286 bayes_pls_golite062009
  • Wnt-protein binding
    		•  2.04664201899031 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle