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Protein Overview: lite-1

General Information:
Name(s) found: lite-1 / CE29579 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00001803 locus:lite-1 High-energy light unresponsive protein 1 status:Partially_confirmed UniProt:Q17990 protein_id:CCD64541.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 439 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    neuronal cell body [IDA]
    neuron projection [IDA]
    Biological Process: sensory perception of taste [IEALink to PubMed article]
    locomotory behavior [IMP]
    response to UV [IMP]
    response to blue light [IMP]
    Molecular Function: transmembrane receptor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPPSSHSNI FHSTFKHTVK ETMANAKKTM IAKILSSRNK WAICDRTLYP IYYLLLILGL  60
   61 NQSIRPNNSL LFRIYSWLVF CLLLFTTLRK FNQVGVRPNG TRENLQEFFA NPRSMITLCN 120
  121 ALIMLSGLLA SLQLYTLGAK RLKPLKILCQ FSLNVRTKQA ERRQFMINTF LAVFSGLLAL 180
  181 TMAATYAMSK WGYILYIVGT PNLDTETIFC VLLDSYALFV SRAAISALAI LFYQHCSVIR 240
  241 RSIKHLINEM VPAEQDECPL PESSLQKIHD CQISYQRIFN GKAVIEEYYS FVLFYSYGVC 300
  301 IPIFCFLMFV GMSAQSICWS EVVSIVIWIV NAILVLLLFS LPAFMINEDG DRLVASSFRM 360
  361 YHETFHEERD LTVLSQMTFF TFQIHSTKLT LSACNYFYMD RSILLSLFSA ILTYFLILWE 420
  421 FDIKNNQSLQ NIANHTIHT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..191] deduced N/A No confident structure predictions are available.
    2 View Details [192..259] deduced N/A No confident structure predictions are available.
    3 View Details [260..439] MSA 3.454995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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