| Protein: | lite-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 439 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lite-1.
| Description | E-value | Query Range |
Subject Range |
|
|
265.0 | [0..13] | [439..1] |
|
Region A: Residues: [1-191] |
1 11 21 31 41 51
| | | | | |
1 MPPPSSHSNI FHSTFKHTVK ETMANAKKTM IAKILSSRNK WAICDRTLYP IYYLLLILGL 60
61 NQSIRPNNSL LFRIYSWLVF CLLLFTTLRK FNQVGVRPNG TRENLQEFFA NPRSMITLCN 120
121 ALIMLSGLLA SLQLYTLGAK RLKPLKILCQ FSLNVRTKQA ERRQFMINTF LAVFSGLLAL 180
181 TMAATYAMSK W
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [192-259] |
1 11 21 31 41 51
| | | | | |
1 GYILYIVGTP NLDTETIFCV LLDSYALFVS RAAISALAIL FYQHCSVIRR SIKHLINEMV 60
61 PAEQDECP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [260-439] |
1 11 21 31 41 51
| | | | | |
1 LPESSLQKIH DCQISYQRIF NGKAVIEEYY SFVLFYSYGV CIPIFCFLMF VGMSAQSICW 60
61 SEVVSIVIWI VNAILVLLLF SLPAFMINED GDRLVASSFR MYHETFHEER DLTVLSQMTF 120
121 FTFQIHSTKL TLSACNYFYM DRSILLSLFS AILTYFLILW EFDIKNNQSL QNIANHTIHT 180
181
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
