Protein Overview: ech-5

General Information:
Name(s) found:	ech-5 / CE27172 [WormBase]
Description(s) found: Found 15 descriptions. SHOW ALL	WBGene00001154 locus:ech-5 status:Partially_confirmed UniProt:O45106 protein_id:AAK29838.1 [WormBase]
Organism:	Caenorhabditis elegans
Length:	284 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	metabolic process [IEA] menaquinone biosynthetic process [IEA]
Molecular Function:	naphthoate synthase activity [IEA] catalytic activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSQKILLNL RAFAFHPLAY STTTNPANEV FIERLTGKDE GITILNMNRP AKKNSLGRVF  60
   61 MDQFREVLDE LKYDPKTRVV ILNSKCDNVF CSGADLKERK TMSQQEATRF VNGLRDSFTD 120
  121 VERLPQPVIA AIDGFALGGG LELALACDIR VASQKAKMGL VETKWALIPG AGGSQRLYRI 180
  181 VGVAKAKELI YTAEVLNGAD AAKLGVVNHV VEANPIEKSL EIARKIIPRG PIAVKLAKLA 240
  241 INLGSQTDIT SALSVEQQCY AQIKYFEHIL MKICEKKIQK LCET

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..284]	PSI-BLAST	54.69897	AUH protein

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
long-chain-3-hydroxyacyl-CoA dehydrogenase activity	5.99914207874933	bayes_pls_golite062009
long-chain-enoyl-CoA hydratase activity	5.38361434383109	bayes_pls_golite062009
enoyl-CoA hydratase activity	3.92947460544831	bayes_pls_golite062009
CoA carboxylase activity	3.89913842968597	bayes_pls_golite062009
acetyl-CoA carboxylase activity	3.85567083340773	bayes_pls_golite062009
acetyl-CoA C-acyltransferase activity	3.6090947563188	bayes_pls_golite062009
ligase activity, forming carbon-carbon bonds	3.4980371783229	bayes_pls_golite062009
3-hydroxyacyl-CoA dehydrogenase activity	2.44182589784656	bayes_pls_golite062009
dodecenoyl-CoA delta-isomerase activity	1.80820904754223	bayes_pls_golite062009
catalytic activity	1.46154163027498	bayes_pls_golite062009
propionyl-CoA carboxylase activity	1.20853698666984	bayes_pls_golite062009
ligase activity	0.98581896521131	bayes_pls_golite062009
3-hydroxybutyryl-CoA epimerase activity	0.241955774397835	bayes_pls_golite062009
binding	0.222808057179506	bayes_pls_golite062009
racemase and epimerase activity, acting on hydroxy acids and derivatives	0.099208209617217	bayes_pls_golite062009
intramolecular oxidoreductase activity, transposing C=C bonds	0.0918189681606029	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

[View Details]

Source: Reynolds et al. 2008. Manuscript submitted

Philius confidence legend

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