YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ech-5
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSQKILLNL RAFAFHPLAY STTTNPANEV FIERLTGKDE GITILNMNRP AKKNSLGRVF  60
   61 MDQFREVLDE LKYDPKTRVV ILNSKCDNVF CSGADLKERK TMSQQEATRF VNGLRDSFTD 120
  121 VERLPQPVIA AIDGFALGGG LELALACDIR VASQKAKMGL VETKWALIPG AGGSQRLYRI 180
  181 VGVAKAKELI YTAEVLNGAD AAKLGVVNHV VEANPIEKSL EIARKIIPRG PIAVKLAKLA 240
  241 INLGSQTDIT SALSVEQQCY AQIKYFEHIL MKICEKKIQK LCET

Type	Start	End	Confidence
Signal Peptide	1	21	0.52
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	284	0.98