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Protein Overview: CE26830

General Information:
Name(s) found: CE26830 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00021352 status:Confirmed UniProt:Q9BKU2 protein_id:CCD73432.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 370 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: carbohydrate metabolic process [IEALink to PubMed article]
    teichoic acid biosynthetic process [IEALink to PubMed article]
    biosynthetic process [IEALink to PubMed article]
    Molecular Function: nucleotidyltransferase activity [IEALink to PubMed article]
    catalytic activity [IEALink to PubMed article]
    metal ion binding [IEALink to PubMed article]
    glycerol-3-phosphate cytidylyltransferase activity [IEALink to PubMed article]
    phosphotransferase activity, alcohol group as acceptor [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGLAPDGLP KGNRVWADGC YDMVHFGHAN QLRQAKQFGQ KLIVGVHNDE EIRLHKGPPV  60
   61 FNEQERYRMV AGIKWVDEVV ENAPYATTVE TLDKYDCDFC VHGDDITLTA DGKDTYQEVK 120
  121 DHQRYRECKR TCGVSTTDLV GRMLLLTKNH HTQDEHIEQH VERARSLSTD NVAMSPWTRV 180
  181 SRFIPTTTTI LEFAEGRPPK PTDKVVYVTG SFDLFHIGHL AFLEKAKEFG DYLIVGILSD 240
  241 QTVNQYKGSN HPIMSIHERV LSVLAYKPVN EVVFGAPYEI TSDILDQFNV QAVINGFRDN 300
  301 NSSVVNSSLA SIDPFAEAKR RGIYHEVDSG SDMTTDLIID RIIHHRLEYE TRNKKKEKKE 360
  361 ADVAKAMNLI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..202] PSI-BLAST 30.69897 phosphopantetheine adenylyltransferase from Mycobacterium tuberculosis
    2 View Details [203..300] FFAS03 4.96 No description for 2b7lA was found.
    3 View Details [301..370] PSI-BLAST 37.69897 Phosphopantetheine adenylyltransferase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ligase activity, forming carbon-oxygen bonds
    		•  3.78648093277891 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  3.78648093277891 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  3.77519125450118 bayes_pls_golite062009
  • ligase activity
    		•  2.69963581983481 bayes_pls_golite062009
  • catalytic activity
    		•  2.37674226834122 bayes_pls_golite062009
  • ethanolamine-phosphate cytidylyltransferase activity
    		•  2.31031486896772 bayes_pls_golite062009
  • glutamate-tRNA ligase activity
    		•  0.993808666373194 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.911644628339304 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  0.774843857641774 bayes_pls_golite062009
  • binding
    		•  0.520077014845626 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  0.427749234863188 bayes_pls_golite062009
  • methionine-tRNA ligase activity
    		•  0.376417381080717 bayes_pls_golite062009
  • tyrosine-tRNA ligase activity
    		•  0.257183459378457 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.097721445469396 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle