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Protein Overview: mig-5

General Information:
Name(s) found: mig-5 / CE25100 [WormBase]
Description(s) found:
Found 22 descriptions.
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  • WBGene00003241 locus:mig-5 status:Confirmed UniProt:G5EC49 protein_id:CAB61022.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 666 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: embryonic cleavage [IMPLink to PubMed article]
    spindle organization [IMPLink to PubMed article]
    multicellular organismal development [IEALink to PubMed article]
    morphogenesis of an epithelium [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    oviposition [IMPLink to PubMed article]
    cell migration [IMPLink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]
    signal transducer activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPPCTSDCS QIKVFYYLDD ETTPYVSVIE AREGVATLGN FKNSFTKRGY KYYAKELDPD  60
   61 IQREVKVELT TDSDRLRKSQ NGFYEIFLVS TPGYGTLPRN SGTMTRPQRT ALDKRRRRSA 120
  121 DFDATPYSDA SLAPSTIVSR RAGEHLAELY TSNSEDPYQY DEHTRRTGDD SSLYEPLAAR 180
  181 DMNKIYDDDR RRKKQKKERF RRPYVPSTIS SATESSVNSG LPRILEIYLP MKNVPYLGLS 240
  241 VCTIDGHIFV SEIAPEGAVE KDGRVNVGDQ ILQVNRVSFE ELSGPQAVRS LREAASSKRP 300
  301 ITLYISKFAR GAPSEYDDPL ASMASETMPL DVGVWVETAV QNTEKMKALG LDPQEQTATT 360
  361 IDDGTLPFTS TASDDEERML YDQRRNGIPR ALIEEAERKR ENEQNEKIEQ LTEMIDPIIV 420
  421 VRSMARPDSG LAVKNRKWLK ILVPMSFIGR DLVDWLVDHM ADIHNRKKAR IYAARLLAAG 480
  481 LIRHVVSKLT FTEKCYYVFG DGILGNDRNS TDTTGTSGTT MRVEATTEVT YVGSPAPHAL 540
  541 AARVGRNIPH RLETTTLSPV AHDQTWLRRR RDCESPMTND YASMVGESQI GMNPVGNYHV 600
  601 FGTKNNHRQV PAPSQVTSSS LTNVTNSRKW WLRRPSADSS IQYYGSSSFS DSVAERSQPR 660
  661 FRRGEQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..91] PSI-BLAST 8.0 Crystal structure of axin dix domain
    2 View Details [92..406] PSI-BLAST 22.522879 solution structure of the split PH-PDZ Supramodule of alpha-Syntrophin
    3 View Details [407..510] PSI-BLAST 16.0 Segment polarity protein Dishevelled-1
    4 View Details [511..666] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • transcription regulator activity
    		•  2.04426015975991 bayes_pls_golite062009
  • binding
    		•  1.99063774159045 bayes_pls_golite062009
  • DNA binding
    		•  1.63968725174405 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.51035375793093 bayes_pls_golite062009
  • transcription factor activity
    		•  1.16072080355661 bayes_pls_golite062009
  • transcription activator activity
    		•  0.14130464856269 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.13573040816325 bayes_pls_golite062009
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle