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Protein Overview: asp-3

General Information:
Name(s) found: asp-3 / CE19495 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00000216 locus:asp-3 aspartyl protease status:Confirmed UniProt:P55956 protein_id:CCD72415.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 398 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cell death [IMPLink to PubMed article]
    determination of adult lifespan [IMPLink to PubMed article]
    proteolysis [IEALink to PubMed article]
    Molecular Function: aspartic-type endopeptidase activity [IEALink to PubMed article]
    pepsin A activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGRVFLLLA LVALASAIQR IKLEKRTYTR EQYKFGSIQE HLKAKYVPGY IPNKDAFNEG  60
   61 LSDYSNAQYY GPVTIGTPPQ NFQVLFDTGS SNLWVPCANC PFGDIACRMH NRFDCKKSSS 120
  121 CTATGASFEI QYGTGSMKGT VDNDVVCFGH DTTYCTDKNQ GLACATSEPG ITFVAAKFDG 180
  181 IFGMGWDTIS VNKISQPMDQ IFANSAICKN QLFAFWLSRD ANDITNGGEI TLCETDPNHY 240
  241 VGNIAWEPLV SEDYWRIKLA SVVIDGTTYT SGPIDSIVDT GTSLLTGPTD VIKKIQHKIG 300
  301 GIPLFNGEYE VECSKIPSLP NITFNLGGQN FDLQGKDYIL QMSNGNGGST CLSGFMGMDI 360
  361 PAPAGPLWIL GDVFIGRFYS VFDHGNKRVG FATSRTGK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..398] PSI-BLAST 84.69897 REFINED STRUCTURE OF PORCINE PEPSINOGEN AT 1.8 ANGSTROMS RESOLUTION

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • aspartic-type endopeptidase activity
    		•  7.9145950161796 bayes_pls_golite062009
  • aspartic-type peptidase activity
    		•  7.9145950161796 bayes_pls_golite062009
  • peptidase activity
    		•  5.78181196721293 bayes_pls_golite062009
  • endopeptidase activity
    		•  5.4888481808613 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  5.39972232367526 bayes_pls_golite062009
  • hydrolase activity
    		•  4.34796304893506 bayes_pls_golite062009
  • catalytic activity
    		•  1.54514410489082 bayes_pls_golite062009
  • binding
    		•  0.902062095182608 bayes_pls_golite062009
  • receptor binding
    		•  0.561225023505917 bayes_pls_golite062009
  • protein binding
    		•  0.094081389440774 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle