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Protein Overview: CE19037

General Information:
Name(s) found: CE19037 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00012460 locus:dhps-1 Probable deoxyhypusine synthase status:Confirmed UniProt:Q9XXJ0 protein_id:CAA19451.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 371 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    peptidyl-lysine modification to hypusine [IEALink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTNEAAASQ EDIALAQGAV LVKSCQVPDG SIPIRGFDFS TASGPDFSLS AILSSYMSTG  60
   61 FQATHLAQAI QQVNQMLSLR DTPLTCDDDE KLFPYPEGRQ KRSCTIFLGY TSNLVTSGLR 120
  121 EVLRYCVQRN LVDCIVTSAG GIEEDLIKCL KPSYLGTFTM DGAKLRSNGM NRAGNVLIPN 180
  181 DNYCAFEDWL MPILDECLVE QEEKHLNWTP SKLIQRLGER IGDESSILYW AAKHRIPVFC 240
  241 PALTDGSLGD MLYFHSVKSS PGLRVDIVED VRHINTIAVK SFKTGSIILG GGVVKHHINN 300
  301 ANLMRNGADH TVYINTGQEF DGSDSGAQPD EAVSWGKVKP SAGAVKVHAE ATLVFPLLVA 360
  361 ETFAKHEGHK D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..371] PSI-BLAST 162.0 Deoxyhypusine synthase holoenzyme in its high ionic strength, low pH crystal form

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • deoxyhypusine synthase activity
    		•  4.8590235726137 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.51117258094456 bayes_pls_golite062009
  • protein deacetylase activity
    		•  2.11398191156761 bayes_pls_golite062009
  • DNA binding
    		•  2.09930834951157 bayes_pls_golite062009
  • histone deacetylase activity
    		•  2.08718650273166 bayes_pls_golite062009
  • binding
    		•  2.06552694538163 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.00972611627502 bayes_pls_golite062009
  • NAD-dependent protein deacetylase activity
    		•  1.93141177609772 bayes_pls_golite062009
  • NAD-dependent histone deacetylase activity
    		•  1.93141177609772 bayes_pls_golite062009
  • protein binding
    		•  1.52593340148652 bayes_pls_golite062009
  • deacetylase activity
    		•  1.15111805612466 bayes_pls_golite062009
  • transcription factor binding
    		•  1.07103864164531 bayes_pls_golite062009
  • transcription factor activity
    		•  1.0180828203704 bayes_pls_golite062009
  • catalytic activity
    		•  0.739210399081789 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.516307124442946 bayes_pls_golite062009
  • transferase activity
    		•  0.483523935618287 bayes_pls_golite062009
  • transcription cofactor activity
    		•  0.42635585193838 bayes_pls_golite062009
  • transcription corepressor activity
    		•  0.23414654967509 bayes_pls_golite062009
  • hydrolase activity
    		•  0.169696911903799 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle