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Protein Overview: CE18519

General Information:
Name(s) found: CE18519 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00007697 status:Confirmed UniProt:Q9XXK8 protein_id:CAA18771.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 272 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: protein amino acid dephosphorylation [IEALink to PubMed article]
    dephosphorylation [IEALink to PubMed article]
    Molecular Function: protein tyrosine phosphatase activity [IEALink to PubMed article]
    phosphatase activity [IEALink to PubMed article]
    protein tyrosine/serine/threonine phosphatase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWKITENLYL AQLPMIVGPT SKQEFSKNDI KRVLTLTTEP ISEKQKIGGV DYKFLHLLDM  60
   61 PDEPILDNAI LETAVLYINE GVEKEENVGV HCLAAVSRSV SICAAYLMYK NQWPVEKALK 120
  121 MIESVRKTIG PNAGFLAQLK IWERSGMSFS ADQYKNLKID IPGITCVDSK TIWRQPVIDD 180
  181 QTKVRFKCRQ CRKVIFNSDN IVHPLAEACQ KYLIEPMAWL NVSGATCSVS HTCGAKLGTF 240
  241 IASGSKCNGC NKFVRQWIFI NRTKLDKVEI AT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..162] PSI-BLAST 30.39794 Crystal structure of JSP-1
    2 View Details [163..272] FFAS03 0.976 Solution structure of the Skeletal muscle LIM-protein 1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • transcription regulator activity
    		•  3.05724284602407 bayes_pls_golite062009
  • binding
    		•  2.8684204787273 bayes_pls_golite062009
  • DNA binding
    		•  2.82694392055315 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.67693765260774 bayes_pls_golite062009
  • transcription factor activity
    		•  2.19990269987205 bayes_pls_golite062009
  • protein binding
    		•  1.30321965120678 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  1.20569507423504 bayes_pls_golite062009
  • transcription activator activity
    		•  1.13340247022105 bayes_pls_golite062009
  • transcription factor binding
    		•  0.97712107394702 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.863365919140416 bayes_pls_golite062009
  • ligand-dependent nuclear receptor activity
    		•  0.799931773272387 bayes_pls_golite062009
  • transcription cofactor activity
    		•  0.161926196097185 bayes_pls_golite062009
  • catalytic activity
    		•  0.133319360419662 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
    		•  0.0993294811617091 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.0849070471490733 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle