| Protein: | CE18519 |
| Organism: | Caenorhabditis elegans |
| Length: | 272 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18519.
| Description | E-value | Query Range |
Subject Range |
|
|
230.0 | [0..1] | [270..27] |
|
|
230.0 | [0..1] | [270..27] |
|
|
229.0 | [0..3] | [269..29] |
|
|
228.0 | [0..3] | [270..29] |
|
|
223.0 | [0..1] | [270..26] |
|
|
222.0 | [0..1] | [270..40] |
|
|
218.0 | [0..1] | [269..21] |
|
|
210.0 | [0..1] | [269..1] |
|
|
207.0 | [0..1] | [266..3] |
|
Region A: Residues: [1-162] |
1 11 21 31 41 51
| | | | | |
1 MWKITENLYL AQLPMIVGPT SKQEFSKNDI KRVLTLTTEP ISEKQKIGGV DYKFLHLLDM 60
61 PDEPILDNAI LETAVLYINE GVEKEENVGV HCLAAVSRSV SICAAYLMYK NQWPVEKALK 120
121 MIESVRKTIG PNAGFLAQLK IWERSGMSFS ADQYKNLKID IP
|
| Detection Method: |  |
| Confidence: | 30.39794 |
| Match: | 1wrmA |
| Description: | Crystal structure of JSP-1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [163-272] |
1 11 21 31 41 51
| | | | | |
1 GITCVDSKTI WRQPVIDDQT KVRFKCRQCR KVIFNSDNIV HPLAEACQKY LIEPMAWLNV 60
61 SGATCSVSHT CGAKLGTFIA SGSKCNGCNK FVRQWIFINR TKLDKVEIAT
|
| Detection Method: | |
| Confidence: | 0.976 |
| Match: | 2cupA |
| Description: | Solution structure of the Skeletal muscle LIM-protein 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.05724284602407 | bayes_pls_golite062009 |
| binding | 2.8684204787273 | bayes_pls_golite062009 |
| DNA binding | 2.82694392055315 | bayes_pls_golite062009 |
| nucleic acid binding | 2.67693765260774 | bayes_pls_golite062009 |
| transcription factor activity | 2.19990269987205 | bayes_pls_golite062009 |
| protein binding | 1.30321965120678 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.20569507423504 | bayes_pls_golite062009 |
| transcription activator activity | 1.13340247022105 | bayes_pls_golite062009 |
| transcription factor binding | 0.97712107394702 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.863365919140416 | bayes_pls_golite062009 |
| ligand-dependent nuclear receptor activity | 0.799931773272387 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.161926196097185 | bayes_pls_golite062009 |
| catalytic activity | 0.133319360419662 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.0993294811617091 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.0849070471490733 | bayes_pls_golite062009 |
