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Protein Overview: cyl-1

General Information:
Name(s) found: cyl-1 / CE17597 [WormBase]
Description(s) found:
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  • WBGene00000876 locus:cyl-1 status:Confirmed UniProt:G5EBX3 protein_id:CAB01416.1 [WormBase]
  • pir||T20154 hypothetical protein C52E4.6a - Caenorhabditis elegans [NCBI NR]
  • gi|45445294|gb|AAS64750.1| cyclin L; C52E4.6a [Caenorhabditis elegans] [NCBI NR]
  • gi|3875193|emb|CAB01416.1| C. elegans protein C52E4.6a, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17558872|ref|NP_506007.1| CYclin L family member (cyl-1) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE17597 WBGene00000876 locus:cyl-1 status:Confirmed TR:Q7JLC3 protein_id:CAB01416.1 [wormpep150.fasta]
  • 17597 WBGene00000876 locus:cyl-1 status:Confirmed TR:Q7JLC3 protein_id:CAB01416.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • cyclin (56.0 kD) (5M472) [Caenorhabditis elegans]gi|3875193|emb|CAB01416.1| Hypothetical protein C52E4.6a [Caenorhabditis elegans]gi|45445294|gb|AAS64750.1| cyclin L; C52E4.6a [Caenorhabditis elegans]gi|7497834|pir||T20154 hypothetical protein C52E4.6a [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q18789 protein_id:CAB01416.1 [wormpep115.fasta.reversed]
  • CE17597 status:Confirmed TR:Q18789 protein_id:CAB01416.1 [wormpep80.hongbin]
  • CE17597 WBGene00000876 locus:cyl-1 status:Confirmed UniProt:Q7JLC3_CAEEL protein_id:CAB01416.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE17597 WBGene00000876 locus:cyl-1 status:Confirmed UniProt:Q7JLC3_CAEEL protein_id:CAB01416.1| [wormORF-contam.fasta]
  • CYclin L family member (cyl-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • cyclin L; C52E4.6a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C52E4.6a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE17597 WBGene00000876 locus:cyl-1 status:Confirmed UniProt:Q7JLC3 protein_id:CAB01416.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE17597 WBGene00000876 locus:cyl-1 status:Confirmed UniProt:G5EBX3 protein_id:CAB01416.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CYclin L OS=Caenorhabditis elegans GN=cyl-1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 480 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    determination of adult lifespan [IMPLink to PubMed article]
    regulation of transcription [IEALink to PubMed article]
    growth [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    regulation of cyclin-dependent protein kinase activity [IEALink to PubMed article]
    Molecular Function: protein kinase binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFVEMRKL AEAKVQNMIR TIVKPKEQNG NVEPKKEEDE KFESTYKQNE NTQITPSSFG  60
   61 KRPLYSKVDI NCDKWLMTLD EESRLKIDNP PSLVDGLSKE TESELRYLGC ELIQQGAILL 120
  121 KLPQTAAATG QILFQRYYYQ KSFVRYHFEH AVQACLLLAS KIEEEPRRPR EVYNVFHRLE 180
  181 RLHRLQQSGH DINKETTRGM KPPAVDMNYI NTKQHMINSE RRILATLGFV VHVKHPHRLI 240
  241 VAYGHTLGIT QSRPDILQRS WNYMNDGLRT DIFMRYKPET IACACIFLAA RTVENPIALP 300
  301 STPFHWFEAF DTSDRDVEAI ALQLVGLYAR RTFPNWPRIK AELDALRSVK DAEMKAVKAK 360
  361 EIAENLAKMA PDGEKSTSTV TIGKDSRKVS PDRKNGTKDR GEADRGKKEK DRHRRRSNDR 420
  421 DGRGDRRDRD KDRGDRRKDE KKDRRKRTRS RSRDRKDKNR NRDVGKRYRK ESSTPPRSRR 480
  481

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..360] PSI-BLAST 49.30103 No description for 2pk2A was found.
    2 View Details [361..480] MSA 1.195993 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cyclin-dependent protein kinase regulator activity
    		•  6.12919068656167 bayes_pls_golite062009
  • protein kinase regulator activity
    		•  2.90083336559452 bayes_pls_golite062009
  • kinase regulator activity
    		•  2.84789294954357 bayes_pls_golite062009
  • binding
    		•  2.4204867358489 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.86024002251052 bayes_pls_golite062009
  • protein binding
    		•  1.47106731485576 bayes_pls_golite062009
  • kinase activity
    		•  1.38878672278174 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.23878797237176 bayes_pls_golite062009
  • DNA binding
    		•  1.18961617410859 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.13015830171495 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.12685411405053 bayes_pls_golite062009
  • protein kinase activity
    		•  0.957590284872001 bayes_pls_golite062009
  • enzyme regulator activity
    		•  0.729629809946521 bayes_pls_golite062009
  • protein serine/threonine kinase activity
    		•  0.567809158275482 bayes_pls_golite062009
  • transcription factor activity
    		•  0.567104149291415 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.56301729141837 bayes_pls_golite062009
  • transferase activity
    		•  0.532488713136535 bayes_pls_golite062009
  • kinase binding
    		•  0.451409627821468 bayes_pls_golite062009
  • transcription factor binding
    		•  0.396734044657235 bayes_pls_golite062009
  • enzyme binding
    		•  0.145967754156613 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle