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Protein Overview: selb-1

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..459] PSI-BLAST 40.69897 Crystal structure of translation elongation factor SelB from Methanococcus maripaludis in complex with GDP

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • structural constituent of ribosome
  • 3.43310971482123 bayes_pls_golite062009
  • structural molecule activity
  • 3.19024260989331 bayes_pls_golite062009
  • translation elongation factor activity
  • 3.12363774852502 bayes_pls_golite062009
  • nucleic acid binding
  • 3.01090004832643 bayes_pls_golite062009
  • translation initiation factor activity
  • 2.27248294660956 bayes_pls_golite062009
  • translation regulator activity
  • 2.20347076721097 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 2.18748808024313 bayes_pls_golite062009
  • binding
  • 2.01866595777668 bayes_pls_golite062009
  • DNA binding
  • 1.7904783386531 bayes_pls_golite062009
  • transcription regulator activity
  • 1.68903321260301 bayes_pls_golite062009
  • transcription factor activity
  • 0.603758349693077 bayes_pls_golite062009
  • translation termination factor activity
  • 0.269303802954244 bayes_pls_golite062009
  • translation release factor activity
  • 0.252222008028593 bayes_pls_golite062009
  • protein binding
  • 0.242047208982959 bayes_pls_golite062009
  • ATP binding
  • 0.1860481660648 bayes_pls_golite062009
  • adenyl ribonucleotide binding
  • 0.152859582615242 bayes_pls_golite062009
  • adenyl nucleotide binding
  • 0.138615225841109 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle