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Protein Overview: CE16843

General Information:
Name(s) found: CE16843 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00015700 protease status:Partially_confirmed UniProt:O45072 protein_id:AAC02571.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 394 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: proteolysis [IEALink to PubMed article]
    Molecular Function: aspartic-type endopeptidase activity [IEALink to PubMed article]
    pepsin A activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALPFFLLLP NAHFSSFCMH LVRKEHSTCL MGPVVSNRLH SSSFKSKHTI HKGQHQHVAD  60
   61 FRDFAYFGNI TLGTPIESTA EQTFLVVLDT GSSNVWVPDN SCGIDDKKSA CTYKKKYFGT 120
  121 DSSSYEKDGT PFSISYGTGS ASGYFGKDTL CFSDTTLCIK SQIFGQANNI APFFANQEID 180
  181 GILGLGFTDL AVHSVPPPFV NAVEQGLVDE PIFTVYLEHH GIKKEASGGY FTYGGEDPDH 240
  241 CGEIITWIPL TKAAYWQFRM QGIGIDNVNE HKNGWEVISD TGTSFIGGPG KVIQDIANKY 300
  301 GATYDEYSDS YVIPCSEIKN LRSLKMKIND LTFEIDPINL VAHPDSSECD LTLFDMYGGG 360
  361 FGPSWILGDP FIRQFCNIHD IKNKRIGLAH SKQQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..394] PSI-BLAST 82.0 REFINED STRUCTURE OF PORCINE PEPSINOGEN AT 1.8 ANGSTROMS RESOLUTION

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • aspartic-type endopeptidase activity
    		•  7.9145950161796 bayes_pls_golite062009
  • aspartic-type peptidase activity
    		•  7.9145950161796 bayes_pls_golite062009
  • peptidase activity
    		•  5.78181196721293 bayes_pls_golite062009
  • endopeptidase activity
    		•  5.4888481808613 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  5.39972232367526 bayes_pls_golite062009
  • hydrolase activity
    		•  4.34796304893506 bayes_pls_golite062009
  • catalytic activity
    		•  1.54514410489082 bayes_pls_golite062009
  • binding
    		•  0.902062095182608 bayes_pls_golite062009
  • receptor binding
    		•  0.561225023505917 bayes_pls_golite062009
  • protein binding
    		•  0.094081389440774 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.51

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle