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Protein Overview: lact-9

General Information:
Name(s) found: lact-9 / CE16649 [WormBase]
Description(s) found:
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  • WBGene00012890 locus:lact-9 status:Partially_confirmed UniProt:O62481 protein_id:CAA16386.1 [WormBase]
  • pir||T26938 hypothetical protein Y45F10D.11 - Caenorhabditis elegans [NCBI NR]
  • gi|3880999|emb|CAA16386.1| C. elegans protein Y45F10D.11a, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17543484|ref|NP_502657.1| Y45F10D.11 [Caenorhabditis elegans] [NCBI NR]
  • gi|115533026|ref|NP_001041033.1| beta-LACTamase domain containing family member (lact-9) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE16649 WBGene00012890 status:Partially_confirmed TR:O62481 protein_id:CAA16386.1 [wormpep150.fasta]
  • 16649 WBGene00012890 status:Partially_confirmed TR:O62481 protein_id:CAA16386.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • lactamase beta (4O546) [Caenorhabditis elegans]gi|3880999|emb|CAA16386.1| Hypothetical protein Y45F10D.11 [Caenorhabditis elegans]gi|7509881|pir||T26938 hypothetical protein Y45F10D.11 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:O62481 protein_id:CAA16386.1 [wormpep115.fasta.reversed]
  • CE16649 status:Predicted [wormpep80.hongbin]
  • CE16649 WBGene00012890 locus:lact-9 status:Partially_confirmed UniProt:O62481_CAEEL protein_id:CAA16386.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE16649 WBGene00012890 locus:lact-9 status:Partially_confirmed UniProt:O62481_CAEEL protein_id:CAA16386.1| [wormORF-contam.fasta]
  • Hypothetical protein Y45F10D.11a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Y45F10D.11a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE16649 WBGene00012890 locus:lact-9 status:Partially_confirmed TR:O62481 protein_id:CAA16386.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE16649 WBGene00012890 locus:lact-9 status:Partially_confirmed UniProt:O62481 protein_id:CAA16386.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • Beta-LACTamase domain containing OS=Caenorhabditis elegans GN=lact-9 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 407 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    response to antibiotic [IEALink to PubMed article]
    beta-lactam antibiotic catabolic process [IEALink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: phosphopantetheine binding [IEALink to PubMed article]
    beta-lactamase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWYTSCPKM LLGATAVAVP LGATVFRRES EKSENLLKIK KAKELVETTM AIQGIPGLSI  60
   61 AVSLDGKMVW KSGFGYANLE SFAKCTGDSV MRIASISKPI TATLAAQCVE NGTLDLDEDI 120
  121 RKYLPEFPAK KFKNEDVKIT MRQLLSHSAG IRHYATEKKK SETHEDPSNN NTETPEFLSN 180
  181 KPYNSSLDAL AIFKNDDLVE KPGSKFSYTT YGLTLAGAVL EKCSGKTYRQ LANQLFSDLG 240
  241 MRNTQLDTKE KIVPGRASYY QRNSKNILEN CPEVDCSNKF AGGGIISNTT DLLIIANAIL 300
  301 HSILSDSKNC LLQRETIRKF LEKQVPVDSK TSTGLGWFLV DGKDLKSIDG NISNSSFFYH 360
  361 TGAAVGASSV LLVNTSSGVC VAILCNLQNT TVLKLGRDIG DLFHGEI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..407] PSI-BLAST 64.09691 AMPC beta-Lactamase, class C

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • serine-type D-Ala-D-Ala carboxypeptidase activity
    		•  3.37745387761459 bayes_pls_golite062009
  • penicillin binding
    		•  3.16077730467133 bayes_pls_golite062009
  • serine-type carboxypeptidase activity
    		•  3.02516915958448 bayes_pls_golite062009
  • serine-type exopeptidase activity
    		•  2.98959517344587 bayes_pls_golite062009
  • peptidase activity
    		•  2.83039919794123 bayes_pls_golite062009
  • hydrolase activity
    		•  2.49793880633218 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  2.44010191138805 bayes_pls_golite062009
  • carboxypeptidase activity
    		•  2.34154596924818 bayes_pls_golite062009
  • catalytic activity
    		•  2.2253600206851 bayes_pls_golite062009
  • serine-type peptidase activity
    		•  2.06335522739332 bayes_pls_golite062009
  • serine hydrolase activity
    		•  2.05686596429459 bayes_pls_golite062009
  • drug binding
    		•  2.00354593744547 bayes_pls_golite062009
  • exopeptidase activity
    		•  1.47021212834188 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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