YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE13277

General Information:
Name(s) found: CE13277 [WormBase]
Description(s) found:
Found 20 descriptions.
SHOW ALL
  • WBGene00020268 locus:hpo-19 status:Confirmed UniProt:O16521 protein_id:CCD72032.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 309 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: electron transport [IEALink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    pyrimidine nucleotide biosynthetic process [IEALink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed article]
    nitrate assimilation [IEALink to PubMed article]
    Molecular Function: cytochrome-b5 reductase activity [IEALink to PubMed article]
    oxidoreductase activity [IEALink to PubMed article]
    iron ion binding [IEALink to PubMed article]
    FAD binding [IEALink to PubMed article]
    NAD or NADH binding [IEALink to PubMed article]
    molybdenum ion binding [IEALink to PubMed article]
    oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor [IEALink to PubMed article]
    2 iron, 2 sulfur cluster binding [IEALink to PubMed article]
    heme binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVENNTLIIT GGVVVVSSIA IYIYLKATNT CPFSLCKKSK KRTLVDDSVK YPLPLIEKFE  60
   61 ISHDTRKFRF GLPSKDHILG LPIGQHVYLT ANIDGKIIVR PYTPVSSDED LGFVDLMVKV 120
  121 YFKNTNEKFP EGGKMSQHLE SLKIGDTINF RGPQGNIVYK GHGLFSIKAD KKAEPKNRVF 180
  181 KHLSMIAGGT GITPMLQVIA AILRDPTDTT QIRLLFANQT EDDILCRQEL DDLAKEHPTR 240
  241 FRVWYTVDRP PVMWSYSSGF INDSMIKENL FPPGDDSAVL LCGPPPMINF ACIPNLEKLE 300
  301 YDPANRLLF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..309] PSI-BLAST 71.522879 cytochrome b5 reductase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on NADH or NADPH
    		•  4.30648542212464 bayes_pls_golite062009
  • NADH dehydrogenase (ubiquinone) activity
    		•  4.04090398393497 bayes_pls_golite062009
  • coenzyme binding
    		•  3.33805077160148 bayes_pls_golite062009
  • NADH dehydrogenase activity
    		•  3.28962873390534 bayes_pls_golite062009
  • NADH dehydrogenase (quinone) activity
    		•  3.20430149465423 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, heme protein as acceptor
    		•  3.111558299994 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  3.03192933933799 bayes_pls_golite062009
  • oxidoreductase activity
    		•  3.02740987944465 bayes_pls_golite062009
  • FAD binding
    		•  2.07600122867642 bayes_pls_golite062009
  • arginine binding
    		•  1.58854105635357 bayes_pls_golite062009
  • cytochrome-b5 reductase activity
    		•  1.5685421124725 bayes_pls_golite062009
  • binding
    		•  1.56341797572673 bayes_pls_golite062009
  • ferredoxin-NADP+ reductase activity
    		•  1.46342400843015 bayes_pls_golite062009
  • ferredoxin reductase activity
    		•  1.46342400843015 bayes_pls_golite062009
  • oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
    		•  1.46342400843015 bayes_pls_golite062009
  • catalytic activity
    		•  1.45374095556065 bayes_pls_golite062009
  • tetrahydrobiopterin binding
    		•  1.29331444558985 bayes_pls_golite062009
  • NADP or NADPH binding
    		•  1.18833847639357 bayes_pls_golite062009
  • demethylase activity
    		•  1.1768217851058 bayes_pls_golite062009
  • oxidoreductase activity, acting on iron-sulfur proteins as donors
    		•  0.73475657802914 bayes_pls_golite062009
  • transferase activity
    		•  0.708491789248912 bayes_pls_golite062009
  • FMN binding
    		•  0.649158247260553 bayes_pls_golite062009
  • riboflavin synthase activity
    		•  0.380537461428523 bayes_pls_golite062009
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
    		•  0.33163571415742 bayes_pls_golite062009
  • cofactor binding
    		•  0.205324283520452 bayes_pls_golite062009
  • protein binding
    		•  0.144900113694048 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle