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View Structure Prediction Details

Protein: CE13277
Organism: Caenorhabditis elegans
Length: 309 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE13277.

Description E-value Query
Range		 Subject
Range
gi|112418870, gi... - gi|113679449|ref|NP_001038825.1| cytochrome b5 reductase b5R.2 [Danio rerio], gi|112418870|gb|AAI222...
 272.0 [0..6] [309..5]

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Predicted Domain #1
Region A:
Residues: [1-309] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVENNTLIIT GGVVVVSSIA IYIYLKATNT CPFSLCKKSK KRTLVDDSVK YPLPLIEKFE  60
   61 ISHDTRKFRF GLPSKDHILG LPIGQHVYLT ANIDGKIIVR PYTPVSSDED LGFVDLMVKV 120
  121 YFKNTNEKFP EGGKMSQHLE SLKIGDTINF RGPQGNIVYK GHGLFSIKAD KKAEPKNRVF 180
  181 KHLSMIAGGT GITPMLQVIA AILRDPTDTT QIRLLFANQT EDDILCRQEL DDLAKEHPTR 240
  241 FRVWYTVDRP PVMWSYSSGF INDSMIKENL FPPGDDSAVL LCGPPPMINF ACIPNLEKLE 300
  301 YDPANRLLF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.522879
Match: 1i7pA
Description: cytochrome b5 reductase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
oxidoreductase activity, acting on NADH or NADPH 4.30648542212464 bayes_pls_golite062009
NADH dehydrogenase (ubiquinone) activity 4.04090398393497 bayes_pls_golite062009
coenzyme binding 3.33805077160148 bayes_pls_golite062009
NADH dehydrogenase activity 3.28962873390534 bayes_pls_golite062009
NADH dehydrogenase (quinone) activity 3.20430149465423 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH, heme protein as acceptor 3.111558299994 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor 3.03192933933799 bayes_pls_golite062009
oxidoreductase activity 3.02740987944465 bayes_pls_golite062009
FAD binding 2.07600122867642 bayes_pls_golite062009
arginine binding 1.58854105635357 bayes_pls_golite062009
cytochrome-b5 reductase activity 1.5685421124725 bayes_pls_golite062009
binding 1.56341797572673 bayes_pls_golite062009
ferredoxin-NADP+ reductase activity 1.46342400843015 bayes_pls_golite062009
ferredoxin reductase activity 1.46342400843015 bayes_pls_golite062009
oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor 1.46342400843015 bayes_pls_golite062009
catalytic activity 1.45374095556065 bayes_pls_golite062009
tetrahydrobiopterin binding 1.29331444558985 bayes_pls_golite062009
NADP or NADPH binding 1.18833847639357 bayes_pls_golite062009
demethylase activity 1.1768217851058 bayes_pls_golite062009
oxidoreductase activity, acting on iron-sulfur proteins as donors 0.73475657802914 bayes_pls_golite062009
transferase activity 0.708491789248912 bayes_pls_golite062009
FMN binding 0.649158247260553 bayes_pls_golite062009
riboflavin synthase activity 0.380537461428523 bayes_pls_golite062009
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 0.33163571415742 bayes_pls_golite062009
cofactor binding 0.205324283520452 bayes_pls_golite062009
protein binding 0.144900113694048 bayes_pls_golite062009
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