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Protein Overview: CE13275

General Information:
Name(s) found: CE13275 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00020267 status:Partially_confirmed UniProt:O16522 protein_id:CCD72031.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 303 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: electron transport [IEALink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    pyrimidine nucleotide biosynthetic process [IEALink to PubMed article]
    nitrate assimilation [IEALink to PubMed article]
    Molecular Function: cytochrome-b5 reductase activity [IEALink to PubMed article]
    oxidoreductase activity [IEALink to PubMed article]
    iron ion binding [IEALink to PubMed article]
    FAD binding [IEALink to PubMed article]
    NAD or NADH binding [IEALink to PubMed article]
    molybdenum ion binding [IEALink to PubMed article]
    oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor [IEALink to PubMed article]
    2 iron, 2 sulfur cluster binding [IEALink to PubMed article]
    heme binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVENNTLAIT GGVVLISSVS LFLYLRQLRA EKKSKRTLED DSVKYLLPLI EKFEISHNTR  60
   61 KFRFGLPSKD HILGLPIGHH VYLSANIGGK LIVRSYTPVS CDLDLGYVDL MVKVYFKNTH 120
  121 ERFPDGGKMS QHLESLKIGD TVSFRGPHGS IIYKGSGLFT VRMDKKAEPK NRFFKHLSMI 180
  181 AGGTGITPML QVIAAILRDP IDATQIRLLF ANQTEDDILC RKELDELAEK HPTRFRVWYT 240
  241 VSKASKDWRY STGHINEEMI KEHLFPSNEE SAVLLCGPPA MINCACIPNL DKLGHNSENY 300
  301 LIF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..303] PSI-BLAST 71.69897 CRYSTAL STRUCTURE OF NADH-CYTOCHROME B5 REDUCTASE FROM PIG LIVER AT 2.4 ANGSTROMS RESOLUTION

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on NADH or NADPH
    		•  5.12164086042432 bayes_pls_golite062009
  • NADH dehydrogenase (ubiquinone) activity
    		•  4.82719560919736 bayes_pls_golite062009
  • NADH dehydrogenase activity
    		•  4.10258111244259 bayes_pls_golite062009
  • NADH dehydrogenase (quinone) activity
    		•  3.98767523940821 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  3.81212227280399 bayes_pls_golite062009
  • coenzyme binding
    		•  3.33805077160148 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, heme protein as acceptor
    		•  3.111558299994 bayes_pls_golite062009
  • oxidoreductase activity
    		•  3.02740987944465 bayes_pls_golite062009
  • FAD binding
    		•  2.07600122867642 bayes_pls_golite062009
  • arginine binding
    		•  1.58854105635357 bayes_pls_golite062009
  • cytochrome-b5 reductase activity
    		•  1.5685421124725 bayes_pls_golite062009
  • binding
    		•  1.56341797572673 bayes_pls_golite062009
  • ferredoxin reductase activity
    		•  1.46342400843015 bayes_pls_golite062009
  • ferredoxin-NADP+ reductase activity
    		•  1.46342400843015 bayes_pls_golite062009
  • oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
    		•  1.46342400843015 bayes_pls_golite062009
  • catalytic activity
    		•  1.45374095556065 bayes_pls_golite062009
  • tetrahydrobiopterin binding
    		•  1.29331444558985 bayes_pls_golite062009
  • NADP or NADPH binding
    		•  1.18833847639357 bayes_pls_golite062009
  • demethylase activity
    		•  1.1768217851058 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  0.90349352746963 bayes_pls_golite062009
  • oxidoreductase activity, acting on iron-sulfur proteins as donors
    		•  0.73475657802914 bayes_pls_golite062009
  • transferase activity
    		•  0.708491789248912 bayes_pls_golite062009
  • FMN binding
    		•  0.649158247260553 bayes_pls_golite062009
  • riboflavin synthase activity
    		•  0.380537461428523 bayes_pls_golite062009
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
    		•  0.33163571415742 bayes_pls_golite062009
  • cofactor binding
    		•  0.205324283520452 bayes_pls_golite062009
  • protein binding
    		•  0.144900113694048 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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