YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ile-1

General Information:
Name(s) found: ile-1 / CE11854 [WormBase]
Description(s) found:
Found 21 descriptions.
SHOW ALL
  • WBGene00002070 locus:ile-1 status:Confirmed UniProt:G5EDE8 protein_id:CAB03169.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 492 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSRVLLVL LAVIVTIQAQ NTPVFKKFEY KHSFRAPNLA QRDGSIPFWI VSGDAIASGE  60
   61 QLRLAPSMRS RKGIAWNKRA FLESENFQVD IALKIGGQGR VGADGLGIWY TSQLGALGPV 120
  121 FGGNDFWTGM GLFLDSFDND GQKNNPQVSL MLNDGTRSYD HHTDGSQQIL SSCQRDFRNK 180
  181 PYPVRIRIEY LKNVLTVHID DGMQPTPRYE LCMRAENIFL PRNGYFGVSA ATGGLADDHD 240
  241 VLDFSVFSLF NEQQKPVPVA EQIPQQEKQK YDEEFERQMK EYEQERAKFK EQHPDKVKED 300
  301 DEYDPNKYYE DATARELRLI YESQNAIHQV MQNMDQRLAQ IQQAQTSGVA AAVPHSGGAA 360
  361 PAPVAAGGSF QQHEKNEVIT SLRDLTQTIR DMKQYVNEIF TKTYNIDQKI AQGGAGAGGV 420
  421 DSSMHQKVDS LLNELRTVRA TQIQTSGPGA AANCPNISCV SSTIFMLIIF IQSAIIVAVV 480
  481 FVRSKQDKAK FY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..196] PSI-BLAST 53.0 The Crystal structure of the Carbohydrate recognition domain of the glycoprotein sorting receptor p58/ERGIC-53 reveals a novel metal binding site and conformational changes associated with calcium ion binding
    2 View Details [197..492] PSI-BLAST 12.69897 Heavy meromyosin subfragment

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.77315480906007 bayes_pls_golite062009
  • sugar binding
    		•  1.53959484116223 bayes_pls_golite062009
  • carbohydrate binding
    		•  1.40439904952516 bayes_pls_golite062009
  • transporter activity
    		•  1.29150662073327 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.07075219961504 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.801327928563072 bayes_pls_golite062009
  • protein binding
    		•  0.657665757061848 bayes_pls_golite062009
  • signal transducer activity
    		•  0.631926547812897 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.631926547812897 bayes_pls_golite062009
  • monosaccharide binding
    		•  0.5678336426881 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.546870122670733 bayes_pls_golite062009
  • unfolded protein binding
    		•  0.534220865159691 bayes_pls_golite062009
  • receptor activity
    		•  0.23954333371021 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  0.00800219256384116 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle