YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ile-1
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSRVLLVL LAVIVTIQAQ NTPVFKKFEY KHSFRAPNLA QRDGSIPFWI VSGDAIASGE  60
   61 QLRLAPSMRS RKGIAWNKRA FLESENFQVD IALKIGGQGR VGADGLGIWY TSQLGALGPV 120
  121 FGGNDFWTGM GLFLDSFDND GQKNNPQVSL MLNDGTRSYD HHTDGSQQIL SSCQRDFRNK 180
  181 PYPVRIRIEY LKNVLTVHID DGMQPTPRYE LCMRAENIFL PRNGYFGVSA ATGGLADDHD 240
  241 VLDFSVFSLF NEQQKPVPVA EQIPQQEKQK YDEEFERQMK EYEQERAKFK EQHPDKVKED 300
  301 DEYDPNKYYE DATARELRLI YESQNAIHQV MQNMDQRLAQ IQQAQTSGVA AAVPHSGGAA 360
  361 PAPVAAGGSF QQHEKNEVIT SLRDLTQTIR DMKQYVNEIF TKTYNIDQKI AQGGAGAGGV 420
  421 DSSMHQKVDS LLNELRTVRA TQIQTSGPGA AANCPNISCV SSTIFMLIIF IQSAIIVAVV 480
  481 FVRSKQDKAK FY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle