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Protein Overview: CE11480

General Information:
Name(s) found: CE11480 [WormBase]
Description(s) found:
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  • WBGene00019105 locus:asp-8 status:Partially_confirmed UniProt:O16338 protein_id:CCD67830.1 [WormBase]
  • pir||T31770 hypothetical protein F59D6.3 - Caenorhabditis elegans [NCBI NR]
  • gi|2315321|gb|AAB65878.1| Hypothetical protein F59D6.3 [Caenorhabditis elegans] [NCBI NR]
  • gi|17561740|ref|NP_503825.1| hypothetical protein F59D6.3 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE11480 WBGene00019105 aspartyl protease status:Partially_confirmed TR:O16338 protein_id:AAB65878.1 [wormpep150.fasta]
  • 11480 WBGene00019105 aspartyl protease status:Partially_confirmed TR:O16338 protein_id:AAB65878.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • aspartic protease family member (5D505) [Caenorhabditis elegans]gi|2315321|gb|AAB65878.1| Hypothetical protein F59D6.3 [Caenorhabditis elegans]gi|7504761|pir||T31770 hypothetical protein F59D6.3 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • aspartyl protease status:Partially_confirmed TR:O16338 protein_id:AAB65878.1 [wormpep115.fasta.reversed]
  • CE11480 aspartyl protease status:Partially_confirmed TR:O16338 protein_id:AAB65878.1 [wormpep80.hongbin]
  • CE11480 WBGene00019105 aspartyl protease status:Partially_confirmed UniProt:O16338_CAEEL protein_id:AAB65878.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE11480 WBGene00019105 aspartyl protease status:Partially_confirmed UniProt:O16338_CAEEL protein_id:AAB65878.1| [wormORF-contam.fasta]
  • F59D6.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein F59D6.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE11480 WBGene00019105 aspartyl protease status:Partially_confirmed UniProt:O16338 protein_id:AAB65878.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE11480 WBGene00019105 aspartyl protease status:Partially_confirmed UniProt:O16338 protein_id:CCD67830.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE11480 WBGene00019105 locus:asp-8 aspartyl protease status:Partially_confirmed UniProt:O16338 protein_id:CCD67830.1 [c_elegans-WS236-ecoli-05Mar2013-contam.fasta]
  • CE11480 WBGene00019105 locus:asp-8 status:Partially_confirmed UniProt:O16338 protein_id:CCD67830.1 Aspartic protease 8 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 474 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: proteolysis [IEALink to PubMed article]
    Molecular Function: pepsin A activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQGFLIYYS RLLLDFRAFF CRALALAIFF VQFSICITQL VQKLFICVNT TFLCAERGEM  60
   61 ITGGTKILRN TFQSIKLEDN RKIFIFHKMF GKLISLLGLV ALCSAGQFSI SVEKSGSLRE 120
  121 QLIREGRYGQ ELARIQQLST GNVSFFDHFD EYYTAGVRIG TPAQHFQVAF DTTSSNLWVF 180
  181 GVECRSQNCH GGRGRRDREY NRTASSTFVA GTSSFNLPYD GGHVSGNVGK DTAQFAGFTI 240
  241 QSQDFGIGTA ATRLFGETFD GVLGLGWPAT ALNGTSTTMQ NLLPQLDQKL FTTYFTKSNM 300
  301 HNGTAGGDIM FGAIDTTHCQ SQVNYVPLAY NSFWSYSVDG FSIGTYSRTQ TETTIPDTSS 360
  361 GWTGVPNVVL AGIVKATGAT YDWNHQAYTL PCSSTATLPD MVFTIGGNSY NVRAVEYVVN 420
  421 LNLPNGQCAL SLFGTAASQS GPAWILGDNF LRSYCHVFDF GNSRIGLAKA IQNY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..88] deduced N/A No confident structure predictions are available.
    2 View Details [89..474] PSI-BLAST 85.221849 REFINED STRUCTURE OF PORCINE PEPSINOGEN AT 1.8 ANGSTROMS RESOLUTION

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • aspartic-type endopeptidase activity
    		•  7.9145950161796 bayes_pls_golite062009
  • aspartic-type peptidase activity
    		•  7.9145950161796 bayes_pls_golite062009
  • peptidase activity
    		•  5.78181196721293 bayes_pls_golite062009
  • endopeptidase activity
    		•  5.4888481808613 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  5.39972232367526 bayes_pls_golite062009
  • hydrolase activity
    		•  4.34796304893506 bayes_pls_golite062009
  • catalytic activity
    		•  1.54514410489082 bayes_pls_golite062009
  • protein binding
    		•  1.24436201877985 bayes_pls_golite062009
  • binding
    		•  1.10054369202721 bayes_pls_golite062009
  • receptor binding
    		•  1.06854757360057 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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