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Protein Overview: CE09504

General Information:
Name(s) found: CE09504 [WormBase]
Description(s) found:
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  • WBGene00008985 status:Partially_confirmed UniProt:Q93544 protein_id:CAB02086.1 [WormBase]
  • pir||T21168 hypothetical protein F20G2.1 - Caenorhabditis elegans [NCBI NR]
  • gi|3876150|emb|CAB02086.1| C. elegans protein F20G2.1, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17559962|ref|NP_506406.1| hypothetical protein F20G2.1 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE09504 WBGene00008985 dehydrogenase status:Partially_confirmed TR:Q93544 protein_id:CAB02086.1 [wormpep150.fasta]
  • 09504 WBGene00008985 dehydrogenase status:Partially_confirmed TR:Q93544 protein_id:CAB02086.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • sniffer like family member (5O232) [Caenorhabditis elegans]gi|3876150|emb|CAB02086.1| Hypothetical protein F20G2.1 [Caenorhabditis elegans]gi|7499523|pir||T21168 hypothetical protein F20G2.1 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • dehydrogenase status:Partially_confirmed TR:Q93544 protein_id:CAB02086.1 [wormpep115.fasta.reversed]
  • CE09504 dehydrogenase status:Predicted TR:Q93544 protein_id:CAB02086.1 [wormpep80.hongbin]
  • CE09504 WBGene00008985 dehydrogenase status:Partially_confirmed UniProt:Q93544_CAEEL protein_id:CAB02086.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE09504 WBGene00008985 dehydrogenase status:Partially_confirmed UniProt:Q93544_CAEEL protein_id:CAB02086.1| [wormORF-contam.fasta]
  • Hypothetical protein F20G2.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F20G2.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE09504 WBGene00008985 dehydrogenase status:Partially_confirmed UniProt:Q93544 protein_id:CAB02086.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE09504 WBGene00008985 status:Partially_confirmed UniProt:Q93544 protein_id:CAB02086.1 [wormpep246-ecoli-contam.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_F20G2.1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 249 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: poly-hydroxybutyrate biosynthetic process [IEALink to PubMed article]
    metabolic process [IEALink to PubMed article]
    fatty acid biosynthetic process [IEALink to PubMed article]
    Molecular Function: 3-oxoacyl-[acyl-carrier-protein] reductase activity [IEALink to PubMed article]
    oxidoreductase activity [IEALink to PubMed article]
    NAD or NADH binding [IEALink to PubMed article]
    3-hydroxybutyrate dehydrogenase activity [IEALink to PubMed article]
    acetoacetyl-CoA reductase activity [IEALink to PubMed article]
    2-deoxy-D-gluconate 3-dehydrogenase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPKSILITG ANRGIGLGLL KQFIKNKDVQ IIIGTCRDPS NATELNSIKD TRVHILQLDI  60
   61 DCDDSIRKLG AEVEKLVGED GLTVLINNAG IFVPYDIDGE KSRSTLIRQL ETNTISTVLI 120
  121 TQELLPLLKR AAAKNRGEGY SINRSAIINI SSTAGSITKI DASYNIPLVA YRMSKSALNS 180
  181 FGKSCSVDLA KYHILVTTFC PGWVKTDMGG ANGKLEIDDA TKTLSDNILI LGDAHHGAYL 240
  241 NADLTVIPN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..249] PSI-BLAST 28.69897 Crystal Structure of the putative Carbonyl Reductase Sniffer of Caenorhabditis elegans

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • structural molecule activity
    		•  1.60272619511594 bayes_pls_golite062009
  • binding
    		•  0.982999356179965 bayes_pls_golite062009
  • DNA binding
    		•  0.302492036575815 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.177044638410302 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.150346154405223 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle