Protein Overview: rpm-1

General Information:
Name(s) found:	rpm-1 / CE06730 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00004457 locus:rpm-1 E3 ubiquitin-protein ligase rpm-1 status:Partially_confirmed UniProt:Q17551 protein_id:CCD62087.1 [WormBase] pir\|\|T29165 hypothetical protein C01B7.6 - Caenorhabditis elegans [NCBI NR] gi\|68053006\|sp\|Q17551.1\|RPM1_CAEEL RecName: Full=E3 ubiquitin-protein ligase rpm-1; AltName: Full=Pam/highwire/rpm-1 protein; AltName: Full=Regulator of presynaptic morphology protein 1; AltName: Full=Synapse defective protein 3 [NCBI NR] gi\|17563242\|ref\|NP_505267.1\| Regulator of Presynaptic Morphology family member (rpm-1) [Caenorhabditis elegans] [NCBI NR] gi\|1255373\|gb\|AAA96117.1\| Regulator of presynaptic morphology protein 1 [Caenorhabditis elegans] [NCBI NR] E3 ubiquitin-protein ligase rpm-1 OS=Caenorhabditis elegans GN=rpm-1 PE=1 SV=1 [Swiss-Prot] [wormpep67.fasta] CE06730 WBGene00004457 locus:rpm-1 status:Partially_confirmed SW:Q17551 protein_id:AAA96117.1 [wormpep150.fasta] 06730 WBGene00004457 locus:rpm-1 status:Partially_confirmed TR:Q17551 protein_id:AAA96117.1 [wormpep130-phg-ecoli-orf-rand.fasta] regulator of Presynaptic Morphology RPM-1, Synapses of Amphids Defective SAD-3, Synaptic vesicle tag Abnormal in Mec cells SAM-1, SYnapse Defective SYD-3, protein associated with Myc (rpm-1) [Caenorhabditis elegans]gi\|1255373\|gb\|AAA96117.1\| Regulator of [nrdb_11152004_Chlamydomonas] CE06730 WBGene00004457 locus:rpm-1 status:Partially_confirmed TR:Q17551 protein_id:AAA96117.1 [wormpep132.fasta] 06730 WBGene00004457 locus:rpm-1 status:Partially_confirmed SW:Q17551 protein_id:AAA96117.1 [wormpep150-phg-orf-ecoli-rand.fasta] locus:rpm-1 status:Partially_confirmed TR:Q17551 protein_id:AAA96117.1 [wormpep115.fasta.reversed] CE06730 locus:rpm-1 status:Partially_confirmed [wormpep80.hongbin] CE06730 WBGene00004457 locus:rpm-1 status:Partially_confirmed UniProt:RPM1_CAEEL protein_id:AAA96117.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE06730 WBGene00004457 locus:rpm-1 status:Partially_confirmed UniProt:RPM1_CAEEL protein_id:AAA96117.1\| [wormORF-contam.fasta] Regulator of Presynaptic Morphology family member (rpm-1) [Caenorhabditis elegans] [nr-271106-contam.fasta] Regulator of presynaptic morphology protein 1 [Caenorhabditis elegans] [nr-271106-contam.fasta] Ubiquitin ligase protein rpm-1 (Pam/highwire/rpm-1 protein) (Regulator of presynaptic morphology protein 1) (Synapse defective protein 3) [nr-271106-contam.fasta] CE06730 WBGene00004457 locus:rpm-1 status:Partially_confirmed UniProt:Q17551 protein_id:AAA96117.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] CE06730 WBGene00004457 locus:rpm-1 status:Partially_confirmed UniProt:Q17551 protein_id:CCD62087.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta] CE06730 WBGene00004457 locus:rpm-1 status:Partially_confirmed UniProt:Q17551 protein_id:CCD62087.1 E3 ubiquitin-protein ligase rpm-1 [wormpep246-ecoli-contam.fasta]
Organism:	Caenorhabditis elegans
Length:	3766 amino acids
Gene Ontology:
Cellular Component:	intracellular [IEA] proteinaceous extracellular matrix [IEA]
Biological Process:	regulation of protein stability [IMP] regulation of synapse organization [IGI][IMP] locomotion [IGI] negative regulation of MAPKKK cascade [IGI] cell adhesion [IEA] blood coagulation [IEA]
Molecular Function:	ubiquitin-protein ligase activity [IDA] zinc ion binding [IEA] protein binding [IEA] mitogen-activated protein kinase kinase kinase binding [IPI] hydrolase activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFFLREIDG ERVCSTSTET SIPEDRKSAR RLRKLLYKCA ENTCKPDILR VPAHCGKLDK  60
   61 EEEKSKTPLD QQQQINFHDI LNSKFVVGPP SPFALVAIAK SILARFGNPE EVSEKEDGSE 120
  121 EEAGTSGADE EGKQYKNTDQ LVGASLTCIF EVLEQLSRRD AELCVQALES LLSLIQSMPI 180
  181 DCLQSENRLS MSAMMHVLKT LREDACPSVS SKATSCLVAL SVACGEPEHL GSTIRSLICM 240
  241 KKNIRMSADS TYDMIQMPEN LRKLLLKVRR KALGGDNTAN SPPNWAMVDV HEHSVASSFS 300
  301 LPSLPDSSPS SDTPDDDNRI HSTMACDGTF LYILNYVGLY KLGTGLNETI SGKLYAANQS 360
  361 LQSSKNVQMY LCNGSLYLRR NYSSCISVID TDSLLDIGEV ILPPSCVQHA LFTDGTYFYS 420
  421 ATLIANSTLS TIQLNDSFSP SNEPSSRRSH RLTDVKFTIQ GDLQVPHQLP EFLPANLHPQ 480
  481 TVDLHFTREM AFIQARSGKV YYAGNGTRFG LFETGNNWME LCLPEPIVQI SVGIDTIMFR 540
  541 SGAGHGWIAS VDDKKRNGRL RRLVPSNRRK IVHVCASGHV YGYVSENGKI FMGGLHTMRV 600
  601 NVSSQMLNGL DNVMISSLAL GKSHGVAVTR NGHLFTWGLN NMNQCGRVES TSTTSSPRHS 660
  661 GRQEYQICPI GEHTWLTDTP SVCAQCGLCS ARGVACGRVP RPKGTMCHCG VGESTCLRCG 720
  721 LCRPCGEVTE PAQPGRAQHV QFSSTAAPQR STLHPSRVIL SQGPHDVKVS SVSCGNFHTV 780
  781 LLASDRRVFT FGSNCHGQLG VGDTLSKNTP QQVILPSDTV IVQVAAGSNH TILRANDGSV 840
  841 FTFGAFGKGQ LARPAGEKAG WNAIPEKVSG FGPGFNAFAG WIGADGDSSI IHSHTALLSS 900
  901 DNILKAQIVA NKTNIFIFPR EVGKDYIVIR RKLNVFEHHA SDYKCWYTSW ATDPKYDMLW 960
  961 YYNSAEMEIK GYDIFKKSEK SVGDAFDSLT FLAGAEFAVQ VYDSPAYATS MSLGMQLLSA1020
 1021 TFSANVINLS EFWKEKHGER EQDHEKTIMD GYSVANRFDG TGGGWGYSAN SVEAIQFKVS1080
 1081 KEIRLVGVGL YGGRGEYISK LKLYRQIGTE ADELYVEQIT ETDETVYDCG AHETATLLFS1140
 1141 QPIVIQPNHW HVVSAKISGP SSDCGANGKR HVECDGVTFQ FRKSAVSNNG TDVDVGQIPE1200
 1201 LYYQIVGGSE SRDESDSNKQ LSISRDMSNL FSPAALKNVT AEGIGNLLIL LEWALQRVQI1260
 1261 DEDTNNQVEG SAENQWSQER AGFVAILSMK LISRFVRTVY KEKGCHDEPG IDFANKLVNL1320
 1321 HSMLLEFFFS TDMTGYENRP LIKKEEKVVE EGYTLMKCVS EAVKLFISLS HCFMGSRSLM1380
 1381 NAHLIAVMNK GNHEALILTS AIIGSLAKIE RFAHQLLCST TTTERFPMLS SLLLKHFNCE1440
 1441 KETLASLTSF PNILRFLYDQ TFMRNAYENT SSLAEAILVK VSRDLAIPTD DTLMGPVVHQ1500
 1501 TSSRFRRRSA QPTWDMSDGC ADAIAFRVDS EGIKLHGFGI YLPTEPDRRN FVGEIMMLSP1560
 1561 DSSEKWTCLL RVTAEMSSEE KEVGIVRFPE YVLLSPGVTY AVKVNMMKNT KTFCGEGGVT1620
 1621 QVHLLNGARL FFSGCSMSQN GTTVQRGQLP YLIYSILDQS NSLQIKQETI YDTFTLLLRL1680
 1681 MANKIGAAIT EGGALPACCQ HLMSHINPHV MVYMERFPDK ALEMMSTMEQ LIPMVSNLNG1740
 1741 VERVFHSYDS DDSGCDTPYS GIVTTVVESQ HPYKPNTSSS MVLLFEEADY ICVRFSPDCQ1800
 1801 TAQFDDQLTI YLKIDEHSYM PIERCYGSEW PSYPMILPGN CLMFVLDASS AVEGATSEQM1860
 1861 FGYHVTVTGY LVGYNDSTMR LEQDLVWLSA NACRIMTQLP INPSNIEHLS TAEDDTRHLF1920
 1921 EKHGSLLKKG LSLSHSPTLS ELCTKGQPPP AQSADLQFLR EFLSGHTSTS AGFLAKWLPT1980
 1981 GSVVDASKCQ LSLSHDDLIV GKAVTLKLLC KDQYDREVDC PKLQVEVFAS LGHRNPSSTI2040
 2041 HQNLHIGNLP SSLLIHQNPF QPIIVNHTRY MNIAAMPAYA NYSVEEIRLG FMIEELVKDR2100
 2101 VPLKSSDSSL FSGTWTPTTA GKYRIECKVD GSDISHTYTV EVTERPHRAG KGTITKPSGS2160
 2161 RRGAQMTVAR TVSIPFSSDF SGIRMRLGTT LASTSVGVIP RGALVEFIEE MDNDDGKWIR2220
 2221 LTDETALLYG CNQGVGQVWC LAYHRPLQRE LIPLKADTDR EKAVKLRRKE IEKESNGSKH2280
 2281 HSVSIDAKET YILSPNDVLQ VYSTPAPHSM IDGEKIIGPC DLMSSGWLAN RHGVWIKLTG2340
 2341 VEKYVLQKND PSSETSLSFS TNGNDEEDLE RPIERKKTRL PNALTPSVAD CIRAVFAAFV2400
 2401 WHEHLVKDLM AAAAYLRFHQ NLHNIWQSCE IPSCTNAPAA LQPIVKIWRE ICEVVETSVE2460
 2461 QHLIMPPVSN KAMRAETVKP PSRSGGCELC DANITVPLTV HLRMAHPGCG GDCLGYGYNS2520
 2521 NGKFTTGWSG ECGAGGRGQS PWYLLCNTCR SQYLKKTPAG HHQERTRRWR EFRFSTSASD2580
 2581 ARPEVIIRQN AMFLLDLNSR LQTESNSSST ATSGWTINLF PTHLSTPSTM PRSQQKRLDV2640
 2641 PPNNSVHQNS YMKLGYSSDP GPKVNVIMSP PNQGADQSAS LNRPGPSAIN EPAEVLQSPS2700
 2701 AALRTLFSNT NPSTSALLKR PVLAFCVEHH DLKRIKSACV QSVRRAVAFS HAFRVWNWLL2760
 2761 RMVSSEYSVS DIILQYLTTL TSYNRLAEYM FSAKKNSNIL PHPWRLCFLA GPIAADMVTQ2820
 2821 LHAFLHTVSI ILQSAGVDGR LKSLCFKSWT LQLTAQEQDL LILTCNILGT VGGILSDTSI2880
 2881 LDSDNRFVKE MKDITKFADI TASSRQAMVI CLTDESGETF WESGEEDKNR SRSLSVQLDE2940
 2941 SAHGEILSLF IDNARDEGYR ISSIAFKAIL EDGRRKDLTS LTLESAYCGW LKCCIKDISH3000
 3001 IQIQFKGPNP ASRIRQLMIL GYPAKTTGTP RLAPSTSHHL FFSDTQRDAF ALFQAISSQA3060
 3061 FCGELSEDDT LRERVIDLLF SRVQLYPLQN YVYTQVVQAM EKEVELLCDK SKRNYSYCCG3120
 3121 LMSLLVRICD SRGNMDSFGQ RNSVLTSITQ LLIFSPVVVQ RQCLNSLECI FASFTPSNVE3180
 3181 VPKIIRNLLV VVGKVIQLQV RDKAAHTVVT VHLCSSVLNA PQNWRVDKSI DMDIGRQTAV3240
 3241 LVENLCNGTY TPEWSNATKC ELANCLLSLI QMPESVSYTE TLSTGGKSKA VAVVSSKRFW3300
 3301 TAISSLSLIK DKSWLELSER WKTVQDEEDQ EPVLLCENHD DGHTVAQVFC VDCDVALCKE3360
 3361 CFTVMHLHKK NRNHGVKNLV QSSTQHDINI HQGCARMKFL NFLILFHGEA LNGMVEVAAD3420
 3421 TLFPTSTSSI QPAMQSSSAF LGIHPMTCRF CGNNVPVEDQ SLDGTCTHED CVNYAKTACQ3480
 3481 VMHTCNHFCG GIRNEEECLP CMTCKREDAA QDGDDVCVIC FTERLGAAPC IRLGCGHMFH3540
 3541 FHCVRMILER RWNGPRIVFR FMQCPLCIQP IEHSGLQDLI EPLKTIRQEV VDKAKMRLEY3600
 3601 DGLLTTPALT DPRSEFYNQP EEYALDRYMY VLCHKCKKAY FGGESRCQAA LDSSQFNPEE3660
 3661 LLCGGCSDTS GVQVCPRHGV EYLEYKCRFC CSIAVYFCFG TTHFCAPCHD DFQRLMSLPK3720
 3721 HLLPTCPVGP RSTPMEEQTC PLKMKHPPTG DEFAMGCGIC RNISTF

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.95

Protein Overview: rpm-1

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: