YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE05540

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

No microscopy data found in the PDR for this protein.

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..165] PSI-BLAST 27.39794 c-Myb, DNA-binding domain
2 View Details [166..331] FFAS03 1.05 crystal structure of the cytotoxic bacterial protein colicin B at 2.5 A resolution
3 View Details [332..418] FFAS03 1.42 No description for 2fj7I was found.
4 View Details [419..755] PSI-BLAST 21.39794 Heavy meromyosin subfragment

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • transcription regulator activity
  • 5.13863038737912 bayes_pls_golite062009
  • DNA binding
  • 4.66369707598026 bayes_pls_golite062009
  • nucleic acid binding
  • 4.51452285155271 bayes_pls_golite062009
  • transcription factor activity
  • 4.06706589695599 bayes_pls_golite062009
  • binding
  • 3.02779747447702 bayes_pls_golite062009
  • RNA binding
  • 2.55617811004485 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 2.41271657675151 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 2.26183812259792 bayes_pls_golite062009
  • transcription repressor activity
  • 1.91962622287073 bayes_pls_golite062009
  • transcription activator activity
  • 1.77700860354597 bayes_pls_golite062009
  • transcription factor binding
  • 1.40653841901929 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
  • 1.14886080629275 bayes_pls_golite062009
  • chromatin binding
  • 1.04132983826241 bayes_pls_golite062009
  • transcription cofactor activity
  • 0.84983974758882 bayes_pls_golite062009
  • protein binding
  • 0.830419844171551 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 0.810065362108106 bayes_pls_golite062009
  • transcription coactivator activity
  • 0.2679415219517 bayes_pls_golite062009
  • transcription corepressor activity
  • 0.25931464844298 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle