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Protein Overview: brf-1

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..62] MSA 1.090992 View MSA. No confident structure predictions are available.
2 View Details [63..284] PSI-BLAST 64.0 Transcription factor IIB (TFIIB), core domain
3 View Details [285..410] deduced N/A No confident structure predictions are available.
4 View Details [411..511] FFAS03 2.58 TBP-binding domain of the transcription factor IIIb Brf1 subunit
5 View Details [512..576] deduced N/A No confident structure predictions are available.
6 View Details [577..759] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • general RNA polymerase II transcription factor activity
  • 5.81887489496763 bayes_pls_golite062009
  • binding
  • 2.94365164362032 bayes_pls_golite062009
  • transcription regulator activity
  • 2.795846725429 bayes_pls_golite062009
  • DNA binding
  • 1.6980508926231 bayes_pls_golite062009
  • nucleic acid binding
  • 1.63159454080484 bayes_pls_golite062009
  • cyclin-dependent protein kinase regulator activity
  • 1.61958639505157 bayes_pls_golite062009
  • protein binding
  • 1.49399866760259 bayes_pls_golite062009
  • protein kinase regulator activity
  • 1.48643751045614 bayes_pls_golite062009
  • kinase regulator activity
  • 1.34524931958191 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 1.09952334871968 bayes_pls_golite062009
  • transcription factor activity
  • 1.0145450763465 bayes_pls_golite062009
  • transcription factor binding
  • 0.749278791251235 bayes_pls_golite062009
  • enzyme regulator activity
  • 0.502596616605714 bayes_pls_golite062009
  • transcription coactivator activity
  • 0.138191616709499 bayes_pls_golite062009
  • transcription activator activity
  • 0.0696060248241566 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle