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Protein Overview: dpf-4

General Information:
Name(s) found: dpf-4 / CE01231 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00001057 locus:dpf-4 status:Confirmed UniProt:Q19086 protein_id:CCD65987.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 629 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: proteolysis [IEALink to PubMed article]
    Molecular Function: serine-type peptidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATEAVYGSW DSPITPDLFG KCNCKSICEM QVVGGNVYWI EQNSVTGKRE LYSKPTNGDT  60
   61 RTRWADGQSV QTAIHEYGGG ALHVLADGSV LFATIEGVFY QKSADSGVEQ LAEGNNRMFR 120
  121 FSDFSATDTH VFCVNETHQA DAKFPENRLI SIDRATKNQN VIAHGADFYA YPRVSPDGKK 180
  181 LVWMQWSLPN MPWDETSIRM ADLKGGESSN EVTLKDGTGK QINYSEPTWD GDELLTVNDS 240
  241 TNWWNVYKSA AEPNSVEKNL NPIQREISYP LWQLGFRNYV LNKKYLVMNA DGILYVRSGD 300
  301 VTVEIPTPGY TVFGYLSLDQ NGSDLFAIAS GPKRASSVIS IDLANKNFPL KVHRESRDSS 360
  361 EIDALEISEP EEFVFKSDGV DVSAGTLPPV LLLGHGGPTA PAQNNLDLKK QFFTSRGIAV 420
  421 FDVNYRGSTG FGTEFRRMLY KNCGVADRDD MLNGAKALVE QGKVDAEKVL ITGSSSGGYL 480
  481 ILSCLISPKN IIKAAVSVYG VADLLALDED THKLERCYNE MLIGKYPEQA SIYEERSPIY 540
  541 HIDKIRTPIA FLHGREDTVV PMSQSITMYE KIRASGVTTA LMLFDGEGHG FRNGQVIKES 600
  601 TEATFYFLMK AVGIEPSISS KIEIVNPKH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..629] PSI-BLAST 70.69897 Prolyl oligopeptidase, N-terminal domain; Prolyl oligopeptidase, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  2.54323107406855 bayes_pls_golite062009
  • catalytic activity
    		•  1.76673721118052 bayes_pls_golite062009
  • peptidase activity
    		•  1.12259137179218 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.808794364499195 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.112278861211575 bayes_pls_golite062009
  • serine hydrolase activity
    		•  0.08085624250764 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle