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Protein Overview: SPBC3E7.13c

General Information:
Name(s) found: SPBC3E7.13c [Sanger Pombe]
Description(s) found:
Found 22 descriptions.
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  • splicing factor, SYF2 family [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 229 amino acids

    Gene Ontology:
    Cellular Component: spliceosomal complex [ISSLink to PubMed article]
    Biological Process: RNA splicing, via transesterification reactions [ISSLink to PubMed article]
    nuclear mRNA splicing, via spliceosome [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSPSHSREA RVEKLKKIRE QMRKSSHENR KEVVQEHSRM RIDPALERRL ERKRMEAEEE  60
   61 LAKIETEEEG GDFERRRAWD WTIEESEKWD QRLRKKKQTI QNVAFSDYHS QASKDYNRGI 120
  121 RDLKPDYEKY DKDKKEEKSK SRSVALYDEA ERLDWVSNKP DKEHVERLVE SIKKQDQRRL 180
  181 KNTKRRGTDE EDHITFINER NRKFNLKLQR FYSKYTKDIK EDLERGTAL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..229] FFAS03 1.05 Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle