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Protein Overview: SPAC521.02

General Information:
Name(s) found: SPAC521.02 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • WLM domain protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 283 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    Biological Process: protein sumoylation [ISSLink to PubMed article]
    response to DNA damage stimulus [ISSLink to PubMed article]
    Molecular Function: zinc ion binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIAILYLYYI LTTSILLSVS FMLRINDDDH PNEKIGFISA IKGDFHDLSS DYLKRIAAMA  60
   61 FPIMKEHGFG VTSLDEVAYN AKFWGRNWNK GECIELVLRD ASNRWLPFEF VMDVFLHELC 120
  121 HIWQGPHDRR FFSHLSTLRA ALIALYAKGY KGPGKYMTWD SFVLANVVGN YNTVVFNGIT 180
  181 LERSTMHGVE TCGGSLQRKK KIRRKPTPSS TKKRKLTRTG QKLGTDMNIR LELLKSPAKP 240
  241 QAQSMRGREA RIAAALLRVD NSNEYKPKDH NSSTTLENYF VVE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..151] FFAS03 1.05 Gelatinase B (MMP-9)
    2 View Details [152..283] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  1.54272760913249 bayes_pls_golite062009
  • binding
    		•  1.39614696313196 bayes_pls_golite062009
  • peptidase activity
    		•  1.29072769897217 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  1.08724880344119 bayes_pls_golite062009
  • catalytic activity
    		•  0.843772148375291 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.459012819207862 bayes_pls_golite062009
  • protein binding
    		•  0.273409914175328 bayes_pls_golite062009
  • metallopeptidase activity
    		•  0.139798501880167 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.39

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle