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Protein Overview: psf3 (reserved)

General Information:
Name(s) found: psf3 (reserved) / SPAC227.16c [Sanger Pombe]
Description(s) found:
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  • gi|6455919|emb|CAB61465.1| GINS complex subunit Psf3 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|61215302|sp|Q9UTC3.1|PSF3_SCHPO RecName: Full=DNA replication complex GINS protein psf3 [NCBI NR]
  • gi|19113882|ref|NP_592970.1| GINS complex subunit Psf3 [Schizosaccharomyces pombe] [NCBI NR]
  • pir||T50172 hypothetical protein SPAC227.16c [imported] - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • GINS complex subunit Psf3 [Sanger Pombe]
  • DNA replication complex GINS protein psf3 OS=Schizosaccharomyces pombe GN=psf3 PE=2 SV=1 [Swiss-Prot]
  • HYPOTHETICAL PROTEIN; SIMILAR TO S. CEREVISIAE YOL146W: Q9UTC3; [pompepVF.fasta]
  • Hypothetical protein [pompep4896]
  • |||hypothetical protein [pompepnew.fasta]
  • SPAC227.16c protein [4896.FASTAC]
  • |||GINS complex|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • hypothetical protein; similar to S. cerevisiae YOL146W [Schizosaccharomyces pombe]gi|6455919|emb|CAB61465.1| SPAC227.16c [Schizosaccharomyces pombe]gi|11359130|pir||T50172 hypothetical protein SPAC227.16c [imported] - fission yeast (Schizosaccharomyces [nrdb_11152004_Chlamydomonas]
  • |||GINS complex subunit|Schizosaccharomyces pombe|chr 1|||Manual [pompep2242005.fasta]
  • (Q9UTC3) Hypothetical protein [pompep4896_normal_reversed]
  • |||GINS complex subunit Psf3 |Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • Probable DNA replication complex GINS protein psf3 [nr-271106-contam.fasta]
  • hypothetical protein SPAC227.16c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPAC227.16c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |psf3||GINS complex subunit Psf3|Schizosaccharomyces pombe|chr 1|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • DNA replication complex GINS protein psf3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=psf3 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 166 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    DNA replication preinitiation complex [IC]
    nuclear replication fork [IC]
    GINS complex [ISSLink to PubMed article]
    Biological Process: DNA replication preinitiation complex assembly [IMPLink to PubMed article]
    DNA replication initiation [IMPLink to PubMed articleLink to PubMed article]
    DNA strand elongation involved in DNA replication [TASLink to PubMed article]
    GINS complex assembly [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYYDIDSIL SENQKVPCTS TVSIPGLGHE GRMVPTGSKV ELPFWLAEVL AINSFVSIHM  60
   61 PAPFSSVVRN ALKANPNSVS IRDITTHYYH FAEKMLHLIS DDSLVQISLN TLRSRAMLIA 120
  121 DASLNPQGAL QQNSQFIEGL DDFEKHILRV SHNAHRSLIN WQNSTS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..166] PSI-BLAST 51.045757 No description for 2q9qD was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3'-5' DNA helicase activity
    		•  3.30007058745861 bayes_pls_golite062009
  • DNA helicase activity
    		•  2.7662250039458 bayes_pls_golite062009
  • binding
    		•  1.27082628880017 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.2336233528067 bayes_pls_golite062009
  • helicase activity
    		•  1.2110072302388 bayes_pls_golite062009
  • transcription elongation regulator activity
    		•  0.37490315580617 bayes_pls_golite062009
  • catalytic activity
    		•  0.161911144249814 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.73

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle