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Protein Overview: SPBC19C7.10

General Information:
Name(s) found: SPBC19C7.10 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • transcription factor [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 432 amino acids

    Gene Ontology:
    Cellular Component: nuclear envelope [IPILink to PubMed article]
    nucleus [IDALink to PubMed article]
    nuclear inner membrane [IMPLink to PubMed article]
    Biological Process: meiotic telomere clustering [IMPLink to PubMed article]
    regulation of transcription, DNA-dependent [IEA]
    gene-specific transcription from RNA polymerase II promoter [RCALink to PubMed article]
    Molecular Function: DNA binding [IEA]
    transcription factor activity [IEA]
    protein binding [IPILink to PubMed article]
    specific RNA polymerase II transcription factor activity [RCALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTENEKSRSL PAERNPLYKD DTLDHTPLIP KCRAQVIEFP DGPATFVRLK CTNPESKVPH  60
   61 FLMRMAKDSS ISATSMFRSA FPKATQEEED LEMRWIRDNL NPIEDKRVAG LWVPPADALA 120
  121 LAKDYSMTPF INALLEASST PSTYATPSRP TAQKSETSEG EPESSTSATT TSVARRTRQR 180
  181 LAEHLENSKK TILQHDNKEE DKEIHSEENE TKDEIKSEKK EPEIKKQEGG SSTEKVGQPS 240
  241 SSDDKAKGST SKDQPSEEEE KTSDIQDRKI KTPIKPSLLG KIRSSVNKGM TDVASQVNRG 300
  301 MTDVASQVNK GVNGVASQVN KGMNGVANQV NKGVTGVASQ VRKPVGKLEK KFENLEKSIG 360
  361 DTLKSSIRSS PKSKKRSRED FEENEDYNAM VPVKRSRITK LESEVYYEKR KVRALGGIAI 420
  421 GLGVGAILPF LF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..186] FFAS03 3.15 DNA-binding domain of Mlu1-box binding protein MBP1
    2 View Details [187..432] MSA 5.188994 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.35947817167513 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.801119074981088 bayes_pls_golite062009
  • DNA binding
    		•  0.747545703099347 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.667563494720209 bayes_pls_golite062009
  • transcription factor activity
    		•  0.465010077250759 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle