| Protein: | SPBC19C7.10 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 432 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC19C7.10.
| Description | E-value | Query Range |
Subject Range |
|
|
187.0 | [0..3] | [414..693] |
|
|
169.0 | [0..2] | [420..595] |
|
Region A: Residues: [1-186] |
1 11 21 31 41 51
| | | | | |
1 MTENEKSRSL PAERNPLYKD DTLDHTPLIP KCRAQVIEFP DGPATFVRLK CTNPESKVPH 60
61 FLMRMAKDSS ISATSMFRSA FPKATQEEED LEMRWIRDNL NPIEDKRVAG LWVPPADALA 120
121 LAKDYSMTPF INALLEASST PSTYATPSRP TAQKSETSEG EPESSTSATT TSVARRTRQR 180
181 LAEHLE
|
| Detection Method: |  |
| Confidence: | 3.15 |
| Match: | 1l3gA |
| Description: | DNA-binding domain of Mlu1-box binding protein MBP1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.35947817167513 | bayes_pls_golite062009 |
| nucleic acid binding | 0.801119074981088 | bayes_pls_golite062009 |
| DNA binding | 0.747545703099347 | bayes_pls_golite062009 |
| transcription regulator activity | 0.667563494720209 | bayes_pls_golite062009 |
| transcription factor activity | 0.465010077250759 | bayes_pls_golite062009 |
|
Region A: Residues: [187-432] |
1 11 21 31 41 51
| | | | | |
1 NSKKTILQHD NKEEDKEIHS EENETKDEIK SEKKEPEIKK QEGGSSTEKV GQPSSSDDKA 60
61 KGSTSKDQPS EEEEKTSDIQ DRKIKTPIKP SLLGKIRSSV NKGMTDVASQ VNRGMTDVAS 120
121 QVNKGVNGVA SQVNKGMNGV ANQVNKGVTG VASQVRKPVG KLEKKFENLE KSIGDTLKSS 180
181 IRSSPKSKKR SREDFEENED YNAMVPVKRS RITKLESEVY YEKRKVRALG GIAIGLGVGA 240
241 ILPFLF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
