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Protein Overview: sec20

General Information:
Name(s) found: sec20 / SPAC23A1.15c [Sanger Pombe]
Description(s) found:
Found 21 descriptions.
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  • SNARE Sec20 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 226 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum membrane [ISSLink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    integral to membrane [IEA]
    Golgi apparatus [IDALink to PubMed article]
    Biological Process: retrograde vesicle-mediated transport, Golgi to ER [ISSLink to PubMed article]
    intracellular protein transport [RCALink to PubMed article]
    Molecular Function: SNAP receptor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADVLNALEE KVVELQQSES VEVIKRHFRE FRKIWETARV ELEYSSIQLD SVLRYEKAVQ  60
   61 EYIRLNRRYR NKIASGEPWL PIAQEIGKIV DEEEITSPSD GSLQKRSMDN SGSWQSDDIY 120
  121 LTSASQVTAA MRDIHAQMVQ AVDMSAENAM ELSSSTNLLE TLQEKYFGVE DVLYTSKRII 180
  181 KSLKLSDRSD YFLVVSGFGF FIFVVVYLLF KRIVWPILSM FLWFLR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..226] FFAS03 1.47 Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle