YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	sec20
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADVLNALEE KVVELQQSES VEVIKRHFRE FRKIWETARV ELEYSSIQLD SVLRYEKAVQ  60
   61 EYIRLNRRYR NKIASGEPWL PIAQEIGKIV DEEEITSPSD GSLQKRSMDN SGSWQSDDIY 120
  121 LTSASQVTAA MRDIHAQMVQ AVDMSAENAM ELSSSTNLLE TLQEKYFGVE DVLYTSKRII 180
  181 KSLKLSDRSD YFLVVSGFGF FIFVVVYLLF KRIVWPILSM FLWFLR

Type	Start	End	Confidence
Cytoplasmic	1	190	0.70
Transmembrane Helix	191	211	0.95
Non-Cytoplasmic	212	226	0.63