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Protein Overview: cwf10

General Information:
Name(s) found: cwf10 / SPBC215.12 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • GTPase Cwf10 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 983 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    U4/U6 x U5 tri-snRNP complex [ISSLink to PubMed article]
    spliceosomal complex [ICLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: RNA splicing, via transesterification reactions [ISSLink to PubMed article]
    nuclear mRNA splicing, via spliceosome [ISSLink to PubMed article]
    Molecular Function: GTP binding [ISSLink to PubMed article]
    GTPase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEDLYDEFG NYIGPENEED EEELFPQAPS PTIAQVPSFE EVIPDEELED VERAEEMALS  60
   61 HLEPQNAVVL HEDKQYYPSA EEVYGSNVDI MVQEQDTQPL SQPIIEPIRH KRIAIETTNV 120
  121 PDTVYKKEFL FGLLTGTDDV RSFIVAGHLH HGKSALLDLL VYYTHPDTKP PKRRSLRYTD 180
  181 THYLERERVM SIKSTPLTLA VSDMKGKTFA FQCIDTPGHV DFVDEVAAPM AISDGVVLVV 240
  241 DVIEGVMINT TRIIKHAILH DMPIVLVLNK VDRLILELRL PPNDAYHKLR HVIDEVNDNI 300
  301 CQISKDLKYR VSPELGNVCF ASCDLGYCFT LSSFAKLYID RHGGIDVDLF SKRLWGDIYF 360
  361 DSKTRKFAKQ SLDGSGVRSF VHFILEPLYK LHTLTISDEA EKLKKHLSSF QIYLKPKDYL 420
  421 LDPKPLLQLI CASFFGFPVG FVNAVTRHIP SPRENAARKA SQSYIGPINS SIGKAILEMS 480
  481 REESAPLVMH VTKLYNTVDA NNFYAFARVY SGQVKKGQKV KVLGENYSLE DEEDMVVAHI 540
  541 AEICVPCARY RLHVDGAVAG MLVLLGGVDN SISKTATIVS DNLKDDPYIF RPIAHMSESV 600
  601 FKVAVEPHNP SELPKLLDGL RKTNKSYPLS ITKVEESGEH TIFGTGEMYM DCLLYDLRTL 660
  661 YSEIEIRVSD PVARFCETAV DTSSIKCFSD TPNKKNRITM VVEPLEKGIS NDIENGKVNI 720
  721 NWPQKRISEF FQKNYDWDLL ASRSIWAFGP DDRGTNILRD DTLSTDVDKN VLNSVKEYIK 780
  781 QGFQWGTREG PLCDETIRNV NFRLMDVVLA PEQIYRGGGQ IIPTARRVCY SSFLTASPRL 840
  841 MEPVYMVEVH APADSLPIIY DLLTRRRGHV LQDIPRPGSP LYLVRALIPV IDSCGFETDL 900
  901 RVHTQGQAMC QMVFDHWQVV PGDPLDKSIK PKPLEPARGS DLARDFLIKT RRRKGLVEDV 960
  961 STTRYFDQEM IDSLKEAGVV LSL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..135] PSI-BLAST 5.522879 Probable GTPase Der, N-terminal and middle domains; Probable GTPase Der, C-terminal domain
    2 View Details [136..983] PSI-BLAST 1000.0 Elongation factor 2 (eEF-2), domain II; Elongation factor 2 (eEF-2), N-terminal (G) domain; Elongation factor 2 (eEF-2), domain IV; Elongation factor 2 (eEF-2)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle