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Protein Overview: tfb2

General Information:
Name(s) found: tfb2 / SPBC13G1.13 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • transcription factor TFIIH complex subunit Tfb2 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 447 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    holo TFIIH complex [ISSLink to PubMed article]
    nucleotide-excision repair factor 3 complex [ISSLink to PubMed article]
    Biological Process: nucleotide-excision repair, DNA duplex unwinding [ISSLink to PubMed article]
    regulation of transcription, DNA-dependent [IEA]
    transcription initiation from RNA polymerase II promoter [ISSLink to PubMed article]
    Molecular Function: general RNA polymerase II transcription factor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQAEFKSSIN DFLEQLPNHA RLYQKPAACL AVFRLLPILA RQYVMSMLFN PMPVALSDFD  60
   61 LWIKLSSKVY QSESFNKLVR MHIFQFDGQY ITLNSEFRKQ FITALTGGGN HNSFGVPCTD 120
  121 EDKHLVTVDF LDAYAKETWE TILHFMVGTP EAKFPGEGVL SLLKRGGLMS GPKNQLRITR 180
  181 AGFQFLLQDI NAQIWTLLLD YLKLSEDTHM DPVQVLHFLF MLGSLDLGRA YSVDFLTDTQ 240
  241 QIMLEDLREY GLVYQRKITS KRFYPTRLAT GLTTDYRSLH GKQSENDDDK GFIIVETNYR 300
  301 LYAYTSSPLQ IAIIGLFANL RARFSNLVVG VITRDSIRRA LMNGIAAEQI ITYLTTHAHP 360
  361 QMRSNVPLLP PTLVDQIYLW ELEKNRLRAT PGILFRDFLT DSGFDQAVEY AKELGVLVWD 420
  421 SSLKRMFFIT TTGAQPMIAY LKRRAVK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..114] MSA 3.029996 View MSA. No confident structure predictions are available.
    2 View Details [115..286] deduced N/A No confident structure predictions are available.
    3 View Details [287..447] MSA 4.035969 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.76

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle