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Protein Overview: arg4

General Information:
Name(s) found: arg4 / SPBC215.08c [Sanger Pombe]
Description(s) found:
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  • pir||T39898 carbamoyl-phosphate synthase (glutamine-hydrolyzing) (EC 6.3.5.5) large chain [similarity] - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|51701297|sp|O94313.1|CARB_SCHPO RecName: Full=Carbamoyl-phosphate synthase arginine-specific large chain; AltName: Full=Arginine-specific carbamoyl-phosphate synthetase, ammonia chain [NCBI NR]
  • gi|3873545|emb|CAA22122.1| arginine specific carbamoyl-phosphate synthase Arg4 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19113477|ref|NP_596685.1| carbamoyl-phosphate synthase Arg4 [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • carbamoyl-phosphate synthase Arg4 [Sanger Pombe]
  • Carbamoyl-phosphate synthase arginine-specific large chain OS=Schizosaccharomyces pombe GN=arg4 PE=2 SV=1 [Swiss-Prot]
  • CARBAMOYL-PHOSPHATE SYNTHASE: O94313; [pompepVF.fasta]
  • Carbamoyl-phosphate synthase [pompep4896]
  • |arg4||carbamoyl-phosphate synthase [pompepnew.fasta]
  • Carbamoyl-phosphate synthase, arginine-specific, large chain (EC 6.3.5.5) (Arginine-specific carbamoyl-phosphate synthetase, ammonia chain) [4896.FASTAC]
  • |arg4||carbamoyl-phosphate synthase|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • carbamoyl-phosphate synthase [Schizosaccharomyces pombe]gi|3873545|emb|CAA22122.1| SPBC215.08c [Schizosaccharomyces pombe]gi|7490180|pir||T39898 carbamoyl-phosphate synthase (glutamine-hydrolyzing) (EC 6.3.5.5) large chain [similarity] - fission yeast [nrdb_11152004_Chlamydomonas]
  • (O94313) Carbamoyl-phosphate synthase [pompep4896_normal_reversed]
  • |arg4||arginine specific carbamoyl-phosphate synthase Arg4 |Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPBC215.08c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Carbamoyl-phosphate synthase arginine-specific large chain (Arginine-specific carbamoyl-phosphate synthetase, ammonia chain) [nr-271106-contam.fasta]
  • hypothetical protein SPBC215.08c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • |arg4||carbamoyl-phosphate synthase Arg4|Schizosaccharomyces pombe|chr 2|||Manual [spombe-190209-contam.fasta]
  • Carbamoyl-phosphate synthase arginine-specific large chain OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=arg4 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 1160 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article]
    carbamoyl-phosphate synthase complex [ISS]
    Biological Process: arginine biosynthetic process [ISSLink to PubMed article]
    Molecular Function: ATP binding [ISSLink to PubMed article]
    manganese ion binding [IEA]
    carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALWATSMRR AIPGISKAFL GSNRVLETAG VSQLSKHLLP QWSGVPHRKI SASATNFNDK  60
   61 VKESNTPDAN AYIRSGHIKA AEHEKVKKVV VVGSGGLSIG QAGEFDYSGA QAIKALRESS 120
  121 VHTILINPNI ATIQSSHSLA DEIYFLPVTA EYLTHLIERE NPDGILLTFG GQTALNVGIQ 180
  181 LDDMGVFARN HVKVLGTPIS TLKTSEDRDL FAKALNEINI PIAESVAVST VDEALQAAEK 240
  241 VSYPVIIRSA YSLGGLGSGF ANNKEELQSM AAKSLSLTPQ ILVEKSLKGW KEVEYEVVRD 300
  301 AANNCITVCN MENFDPLGIH TGDSIVVAPS QTLSDEEYHM LRTAAIKIIR HLGVVGECNV 360
  361 QYALSPNSLE YRVIEVNARL SRSSALASKA TGYPLAYTAA KIALGHTLPE LPNAVTKTTT 420
  421 ANFEPSLDYV VTKIPRWDLS KFQYVNREIG SSMKSVGEVM AVGRTFEESL QKALRQVDPS 480
  481 FLGFMAMPFK DLDNALSVPT DRRFFAVVEA MLNQGYSIDK IHDLTKIDKW FLSKLANMAK 540
  541 VYKELEEIGS LYGLNKEIML RAKKTGFSDL QISKLVGASE LDVRARRKRL DVHPWVKKID 600
  601 TLAAEFPAHT NYLYTSYNAS SHDIDFNEHG TMVLGSGVYR IGSSVEFDWC GVSCARTLRK 660
  661 LGHSTIMVNY NPETVSTDFD ECERLYFEEL SYERVMDIYE METASGIVVS VGGQLPQNIA 720
  721 LKLQETGAKV LGTDPLMIDS AEDRHKFSQI LDKIGVDQPA WKELTSVAEA SKFANAVGYP 780
  781 VLVRPSYVLS GAAMSVIRDE SSLKDKLENA SAVSPDHPVV ITKFIEGARE LDVDAVASKG 840
  841 KLLVHAVSEH VENAGVHSGD ATIALPPYSL SEDILSRCKE IAEKVCKAFQ ITGPYNMQII 900
  901 LAQNPDKPDT PDLKVIECNL RASRSFPFVS KTLGVNFIDV ATRSIIDQEV PAARDLMAVH 960
  961 RDYVCVKVPQ FSWTRLAGAD PYLGVEMSST GEVACFGKDV KEAYWAALQS TQNFKIPLPG1020
 1021 QGILLGGDRP ELAGIAADLS KLGYKLYVAN KDAAKLLQPT SAEVVEFPVK DKRALRAIFE1080
 1081 KYNIRSVFNL ASARGKNVLD QDYVMRRNAV DFNVTLINDV NCAKLFVESL KEKLPSVLSE1140
 1141 KKEMPSEVKR WSEWIGSHDL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..1160] PSI-BLAST 1000.0 Carbamoyl phosphate synthetase, large subunit connection domain; Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain; Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains; Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • carbamoyl-phosphate synthase activity
    		•  10.3961907577933 bayes_pls_golite062009
  • carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
    		•  10.3817460390594 bayes_pls_golite062009
  • carbon-nitrogen ligase activity, with glutamine as amido-N-donor
    		•  7.55690629692775 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  6.95559501787172 bayes_pls_golite062009
  • ligase activity
    		•  1.91091941710895 bayes_pls_golite062009
  • phosphoribosylaminoimidazole carboxylase activity
    		•  1.57708889650281 bayes_pls_golite062009
  • catalytic activity
    		•  1.08688404807699 bayes_pls_golite062009
  • phosphoribosylamine-glycine ligase activity
    		•  1.04915286326924 bayes_pls_golite062009
  • carbon-oxygen lyase activity, acting on phosphates
    		•  0.964679554894316 bayes_pls_golite062009
  • phosphoribosylaminoimidazolecarboxamide formyltransferase activity
    		•  0.898425265043358 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  0.730894973410499 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  0.482425669839603 bayes_pls_golite062009
  • lyase activity
    		•  0.432948879967458 bayes_pls_golite062009
  • ligase activity, forming carbon-sulfur bonds
    		•  0.37779550230552 bayes_pls_golite062009
  • hydroxymethyl-, formyl- and related transferase activity
    		•  0.2431211195117 bayes_pls_golite062009
  • glutathione synthase activity
    		•  0.0685848191991462 bayes_pls_golite062009
  • biotin carboxylase activity
    		•  0.0172732430077291 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle