YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPBC14F5.07

General Information:
Name(s) found: SPBC14F5.07 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • ER-localized ubiquitin ligase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 1242 amino acids

    Gene Ontology:
    Cellular Component: nuclear membrane-endoplasmic reticulum network [ISSLink to PubMed article]
    integral to membrane [IEA]
    endoplasmic reticulum [IDALink to PubMed article]
    Biological Process: ER-associated protein catabolic process [ISSLink to PubMed article]
    protein ubiquitination [ISSLink to PubMed article]
    Molecular Function: ubiquitin-protein ligase activity [ISSLink to PubMed article]
    zinc ion binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNADDEICRV CRCEGAPDSP LFHPCKCTGS IRYVHQECLV EWLGHSKKTH CELCKAKFEF  60
   61 TKVYSESMPR TIPFTILCRK LASTLKQRVI FFTRVLLTFF CWTVLLPLIF KHVWNLNFKI 120
  121 GDTYTIHARN KTFTAPQKPG YFESISQITS SPRLNTLIAN TAEGQVLTFV VTFILITAFL 180
  181 VREWVLQNAV QVADELQGQQ FENVNQNNQA QAAAAAAQNL REVREARQRL AMVMEHLRER 240
  241 QEQRNLELQR NGSFEEIERA RQRFALLGDN IREPQEEEND VDVDEIFNRQ QLNQPALDLN 300
  301 DANSSNSVPV EFNSLHSQNV DYRDEVDSLR PQFNVDEQSS ISHSSNASEN IVDGAVTQAN 360
  361 GIESDFTRVD HEPIIVNNDD ENGNNESENE EVIEEDNLNR NVIAEAQNQV VADEERNAVA 420
  421 RAAQIAEADD ADDFDGILEF LGLRGPITGF LQNCLVIAFV VSVFLTTAVG IPYMSGRLMV 480
  481 EWILFIIHRP TFILRFILSF VNILFDWTVG GAFNIVKILT KLPLLSTVFV KLKLQGIFSS 540
  541 SFQQVSNNMY SWIYDHVFSS SDHAYESLIY YMKTGHKQVV QSFSIFPVFR VCQMFAVILK 600
  601 DFVENYSNRP VDRVFTTLIG YCMFTFLGIS YLNRKQFLFN DPQIRNVELA FREVLRQCGS 660
  661 IAKFGIIFSI ELVVFPIFCG ILLSMCLIGT FKKLAAENLL NVMTVYPAQS IFLAWFIGIT 720
  721 FMFEFAVFIS MVRKIVRPGV LYFLRDPNDP QFHPIREILE KPMLFQLKKI GFSAILYFAF 780
  781 IIGCVGSVIH LLKSTGIIFP IEFTTKPAVF EAPIDLLALE ILIFLSIKLF KPLELTRSFW 840
  841 RTLVSTFCRC LRLSSYVMGQ RYSDEEGYYP KQYFSFLRRI ISKPSDTENQ DDGDKQKAKK 900
  901 DFVQDGFFLW CPSKDVVPVR QGAMLIPVTE NGYEIFGEKK KVEENADYTI TYAPSNFYKR 960
  961 LIALLLFCWI CSTLVTVLLV FVPLSLGRAI YAWCFPNVVK HDFYAYAIGF YSISFPMYAI1020
 1021 HASVKFLKLD YLRSLMNKLN LKIVMRSLVM ALKYLLLAFL GIFILPLLLG AIWELYVAIP1080
 1081 FRTIFNRGTL ALDAFQNWVI GLFMLRMIYF TVTSNEERFV SRLFQDAFRD RWTNPQILPL1140
 1141 LKNVLIPFTS ALIAAVVLPS VFTYVTYPFL SSIFPSASKT LMYRLMHPIF LALLGLALLG1200
 1201 RRFVETSSKW SQGIRDDLYL VGTRLHNFGE SAPPAISESA EK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..128] PSI-BLAST 22.69897 No description for 2d8sA was found.
    2 View Details [129..444] FFAS03 2.06 30S subunit
    3 View Details [445..525] deduced N/A No confident structure predictions are available.
    4 View Details [526..705] MSA 1.043975 View MSA. No confident structure predictions are available.
    5 View Details [706..944] deduced N/A No confident structure predictions are available.
    6 View Details [945..1086] deduced N/A No confident structure predictions are available.
    7 View Details [1087..1242] MSA 1.037979 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle