| Protein: | SPBC14F5.07 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1242 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC14F5.07.
| Description | E-value | Query Range |
Subject Range |
|
|
923.0 | [0..224] | [1230..489] |
|
|
908.0 | [0..191] | [1234..552] |
|
|
903.0 | [0..426] | [1242..224] |
|
|
878.0 | [0..186] | [1228..461] |
|
|
820.0 | [0..71] | [1230..6] |
|
|
789.0 | [0..501] | [1229..613] |
|
|
789.0 | [0..501] | [1241..559] |
|
|
785.0 | [0..501] | [1237..398] |
|
|
783.0 | [0..501] | [1237..260] |
|
|
768.0 | [0..501] | [1229..321] |
|
Region A: Residues: [1-128] |
1 11 21 31 41 51
| | | | | |
1 MNADDEICRV CRCEGAPDSP LFHPCKCTGS IRYVHQECLV EWLGHSKKTH CELCKAKFEF 60
61 TKVYSESMPR TIPFTILCRK LASTLKQRVI FFTRVLLTFF CWTVLLPLIF KHVWNLNFKI 120
121 GDTYTIHA
|
| Detection Method: |  |
| Confidence: | 22.69897 |
| Match: | 2d8sA |
| Description: | No description for 2d8sA was found. |
|
Region A: Residues: [129-444] |
1 11 21 31 41 51
| | | | | |
1 RNKTFTAPQK PGYFESISQI TSSPRLNTLI ANTAEGQVLT FVVTFILITA FLVREWVLQN 60
61 AVQVADELQG QQFENVNQNN QAQAAAAAAQ NLREVREARQ RLAMVMEHLR ERQEQRNLEL 120
121 QRNGSFEEIE RARQRFALLG DNIREPQEEE NDVDVDEIFN RQQLNQPALD LNDANSSNSV 180
181 PVEFNSLHSQ NVDYRDEVDS LRPQFNVDEQ SSISHSSNAS ENIVDGAVTQ ANGIESDFTR 240
241 VDHEPIIVNN DDENGNNESE NEEVIEEDNL NRNVIAEAQN QVVADEERNA VARAAQIAEA 300
301 DDADDFDGIL EFLGLR
|
| Detection Method: | |
| Confidence: | 2.06 |
| Match: | 1dv4A |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [445-525] |
1 11 21 31 41 51
| | | | | |
1 GPITGFLQNC LVIAFVVSVF LTTAVGIPYM SGRLMVEWIL FIIHRPTFIL RFILSFVNIL 60
61 FDWTVGGAFN IVKILTKLPL L
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [526-705] |
1 11 21 31 41 51
| | | | | |
1 STVFVKLKLQ GIFSSSFQQV SNNMYSWIYD HVFSSSDHAY ESLIYYMKTG HKQVVQSFSI 60
61 FPVFRVCQMF AVILKDFVEN YSNRPVDRVF TTLIGYCMFT FLGISYLNRK QFLFNDPQIR 120
121 NVELAFREVL RQCGSIAKFG IIFSIELVVF PIFCGILLSM CLIGTFKKLA AENLLNVMTV 180
181
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [706-944] |
1 11 21 31 41 51
| | | | | |
1 YPAQSIFLAW FIGITFMFEF AVFISMVRKI VRPGVLYFLR DPNDPQFHPI REILEKPMLF 60
61 QLKKIGFSAI LYFAFIIGCV GSVIHLLKST GIIFPIEFTT KPAVFEAPID LLALEILIFL 120
121 SIKLFKPLEL TRSFWRTLVS TFCRCLRLSS YVMGQRYSDE EGYYPKQYFS FLRRIISKPS 180
181 DTENQDDGDK QKAKKDFVQD GFFLWCPSKD VVPVRQGAML IPVTENGYEI FGEKKKVEE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [945-1086] |
1 11 21 31 41 51
| | | | | |
1 NADYTITYAP SNFYKRLIAL LLFCWICSTL VTVLLVFVPL SLGRAIYAWC FPNVVKHDFY 60
61 AYAIGFYSIS FPMYAIHASV KFLKLDYLRS LMNKLNLKIV MRSLVMALKY LLLAFLGIFI 120
121 LPLLLGAIWE LYVAIPFRTI FN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1087-1242] |
1 11 21 31 41 51
| | | | | |
1 RGTLALDAFQ NWVIGLFMLR MIYFTVTSNE ERFVSRLFQD AFRDRWTNPQ ILPLLKNVLI 60
61 PFTSALIAAV VLPSVFTYVT YPFLSSIFPS ASKTLMYRLM HPIFLALLGL ALLGRRFVET 120
121 SSKWSQGIRD DLYLVGTRLH NFGESAPPAI SESAEK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
