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Protein Overview: SPCC4B3.13

General Information:
Name(s) found: SPCC4B3.13 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • MatE family transporter [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 539 amino acids

    Gene Ontology:
    Cellular Component: fungal-type vacuole membrane [IDALink to PubMed article]
    integral to membrane [IEA]
    Biological Process: transmembrane transport [IEA]
    Molecular Function: antiporter activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGENDPLLG SYKPKRRRSS LVYGLSRPQF LDTAASEVSP IPQERPTTSL RKPTPRVQRP  60
   61 ATDVSYGALE ETEENESIAS GLSVQEDFNS KAWWKELTLL IKFATPVVLT SLLQYGEVVT 120
  121 TVFSLGHLGK TELAAASLSN MTATITAFAI YQGIVSALDT VGTQSFGSGN YEMVGLHLQR 180
  181 ILAILLLIQF PIFLIWWKIE GILLFLRQDP LTCMFAAKYM RVMMLASPAY ALFEALKRFL 240
  241 QVQGIFHPVT YILAIVVPIN IFLNYLFVWS PWVGFGFLGA PVAVALTLWS ACAVLIIYIM 300
  301 KVNGRQAWGG FSREALKNWG PLCRLAVPGV IMICSEYWAF ELVTFASGVL GTTELASMSV 360
  361 LSTTSTLSYN LAFGVAAAAA TRVGNLIGAG NTKLAKLATH VSINLGAAIG VIIAVILFLT 420
  421 RNTWTYIFTS DKDVVALVAT IIPLVALINI ADNTQCVAGG LLRGQGRQRI GGVVNFIAYY 480
  481 LLGLPVAIIL CFKLDWGLYG LWIGIGAAIL IIAGVETWCS LHVNWDHLVE LANRQFDEA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..84] FFAS03 1.31 30S subunit
    2 View Details [85..311] Pfam 29.420216 No description for PF01554.9 was found. No confident structure predictions are available.
    3 View Details [312..539] Pfam 36.769551 No description for PF01554.9 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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