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Protein Overview: hrf1

General Information:
Name(s) found: hrf1 / SPBC25H2.06c [Sanger Pombe]
Description(s) found:
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  • pir||T40001 hypothetical protein SPBC25H2.06c - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74627106|sp|P87148.1|YIF1_SCHPO RecName: Full=Protein transport protein yif1; AltName: Full=YIP1-interacting factor 1; AltName: Full=Heavy metal resistance factor 1 [NCBI NR]
  • gi|2104455|emb|CAB08782.1| COPII-coated vesicle component Hrf1 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19113152|ref|NP_596360.1| COPII-coated vesicle component Hrf1 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • COPII-coated vesicle component Hrf1 [Sanger Pombe]
  • Protein transport protein yif1 OS=Schizosaccharomyces pombe GN=hrf1 PE=2 SV=1 [Swiss-Prot]
  • HYPOTHETICAL PROTEIN; SIMILAR TO S. CEREVISIAE YNL263C: P87148; [pompepVF.fasta]
  • Hypothetical protein [pompep4896]
  • |reserved_name_hrf1||hypothetical protein [pompepnew.fasta]
  • Involved in intracellular protein transport (Predicted); involved in ER to Golgi transport (Predicted); interacts physically with SPCC61.04c (Predicted) (PMID 12657649); complexed with SPCC61.04c (Predicted); COPII-coated vesicle component (Predicted); si [4896.FASTAC]
  • |hrf1||involved in intracellular protein transport (predicted)|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • involved in intracellular protein transport (predicted); involved in ER to Golgi transport (predicted); interacts physically with SPCC61.04c (predicted) (PMID 12657649); complexed with SPCC61.04c (predicted); COPII-coated vesicle component (predicted); si [nrdb_11152004_Chlamydomonas]
  • |hrf1||COPII-coated vesicle component |Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (P87148) Hypothetical protein [pompep4896_normal_reversed]
  • |hrf1||COPII-coated vesicle component Hrf1 |Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPBC25H2.06c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Protein transport protein yif1 (YIP1-interacting factor 1) (Heavy metal resistance factor 1) [nr-271106-contam.fasta]
  • hypothetical protein SPBC25H2.06c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • Protein transport protein yif1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=hrf1 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 293 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum membrane [ISS]
    integral to Golgi membrane [ISS]
    ER to Golgi transport vesicle [ISSLink to PubMed article]
    Biological Process: ER to Golgi vesicle-mediated transport [ISSLink to PubMed article]
    intracellular protein transport [RCALink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPKLYHPQP THAIPVSNMR VNTRYEPTAG FSGTSVPSVQ AANPSAYLPN SATAQMGFQL  60
   61 GKNAVNAGQE YVEQNFGKWL STTRLHHYFT VTNSYVVAKL LLIIFPWRRR SWARKLRRSE 120
  121 INGSAEGYCP PAEDLNSPDM YIPLMAFTTH ILLLCALAGL QDDFQPELFG LRASKACAVV 180
  181 LVEFLATRLG CYLLNISSQS QVLDLLAFSG YKFVGLILTS LSKLFEMPWV TRFVFLYMYL 240
  241 ATAFFLLRSL KYAVLPESTM AINATITSHQ RSRRIYFLFF IAASQILFMY VLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..82] MSA 1.048996 View MSA. No confident structure predictions are available.
    2 View Details [83..293] MSA 5.060996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle