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View Structure Prediction Details

Protein: hrf1
Organism: Schizosaccharomyces pombe
Length: 293 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hrf1.

Description E-value Query
Range
Subject
Range
gi|158937260, gi... - gi|80477099|gb|AAI09332.1| Yif1b protein [Mus musculus], ref|XP_284281.2| RIKEN cDNA 9430029K10 [Mus...
355.0 [0..1] [293..15]
gi|62388883, gi|... - gi|62388883|ref|NP_942029.2| Yip1 interacting factor homolog B isoform a [Rattus norvegicus], gi|149...
354.0 [0..2] [293..19]
gi|14043299 - gi|14043299|gb|AAH07644.1| YIF1B protein [Homo sapiens]
352.0 [0..1] [293..15]
gi|55649015 - gi|55649015|ref|XP_512634.1| PREDICTED: Yip1 interacting factor homolog B isoform 5 [Pan troglodytes...
351.0 [0..1] [293..16]

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Predicted Domain #1
Region A:
Residues: [1-82]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPKLYHPQP THAIPVSNMR VNTRYEPTAG FSGTSVPSVQ AANPSAYLPN SATAQMGFQL  60
   61 GKNAVNAGQE YVEQNFGKWL ST

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [83-293]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TRLHHYFTVT NSYVVAKLLL IIFPWRRRSW ARKLRRSEIN GSAEGYCPPA EDLNSPDMYI  60
   61 PLMAFTTHIL LLCALAGLQD DFQPELFGLR ASKACAVVLV EFLATRLGCY LLNISSQSQV 120
  121 LDLLAFSGYK FVGLILTSLS KLFEMPWVTR FVFLYMYLAT AFFLLRSLKY AVLPESTMAI 180
  181 NATITSHQRS RRIYFLFFIA ASQILFMYVL S

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle