Protein Overview: SPBC16E9.14c

General Information:
Name(s) found:	SPBC16E9.14c [Sanger Pombe]
Description(s) found: SHOW ONLY BEST	pir\|\|T39588 hypothetical protein SPBC16E9.14c - fission yeast (Schizosaccharomyces pombe) [NCBI NR] gi\|74626645\|sp\|O14329.1\|YB7E_SCHPO RecName: Full=Uncharacterized metal transporter C16E9.14c [NCBI NR] gi\|2467276\|emb\|CAB16906.1\| cation diffusion family zinc membrane transporter Zrg17 [Schizosaccharomyces pombe] [NCBI NR] gi\|19112588\|ref\|NP_595796.1\| membrane transporter [Schizosaccharomyces pombe] [NCBI NR] membrane transporter [Sanger Pombe] Uncharacterized metal transporter C16E9.14c OS=Schizosaccharomyces pombe GN=SPBC16E9.14c PE=2 SV=1 [Swiss-Prot] ZINC-REGULATED GENE SUGGESTED TO FUNCTION IN ZINC-UPTAKE; SIMILAR TO S. CEREVISIAE ZRG17: O14329; [pompepVF.fasta] ZINC-REGULATED GENE SUGGESTED TO FUNCTION IN ZINC-UPTAKE; BY SIMILARITY TO YEAST ZRG17: O14329; [pompepV13] Zinc-regulated protein [pompep4896] \|\|\|cation efflux family [pompepnew.fasta] SPBC16E9.14c protein [4896.FASTAC] \|\|\|cation efflux family\|Schizosaccharomyces pombe\|chr 2\|\|\|Manual [pombe041504.fasta] Zinc-regulated gene suggested to function in zinc-uptake; by similarity to yeast zrg17 [Schizosaccharomyces pombe]gi\|2467276\|emb\|CAB16906.1\| SPBC16E9.14c [Schizosaccharomyces pombe]gi\|7491409\|pir\|\|T39588 hypothetical protein SPBC16E9.14c - fission yeast [nrdb_11152004_Chlamydomonas] (O14329) Zinc-regulated protein [pompep4896_normal_reversed] \|zrg17\|\|cation diffusion family zinc membrane transporter Zrg17\|Schizosaccharomyces pombe\|chr 2\|\|\|Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta] SPBC16E9.14c [Schizosaccharomyces pombe] [nr-271106-contam.fasta] hypothetical protein SPBC16E9.14c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
Organism:	Schizosaccharomyces pombe
Length:	386 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA] integral to membrane [IEA] cytosol [IDA] Golgi membrane [IPI]
Biological Process:	vesicle-mediated transport [IGI] transmembrane transport [IEA] zinc ion transport [IGI] cellular zinc ion homeostasis [IGI]
Molecular Function:	protein binding [IPI] zinc ion transmembrane transporter activity [IGI]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQNHNIPTA IQIQNPINNN VSVTISDQLP KPSANNPNLL SVDTRPTHRK GHHHKHSLSH  60
   61 QYFLPPKNRQ PLEIPASYPI PTFKETFAIL TFPQKLKLTS SILFFLVAVG VLLSGDATIL 120
  121 LTLSCSLIVE GVLIIINVWR ETLDSFLVWR HTCLRYPFGM QQMELLVDFS FSILLIFLGM 180
  181 NLLKEPAEHA IEDWGNLHHA GDHEEETVHI HLTISLFASA IISGFALLLD HPSAHIRELN 240
  241 SRFFHGLTLV PSLILVLLLS LGYQVGSFLS HLLSLTIAVT ALVNGFSIAK SLALMLLLTY 300
  301 SNKEKVFECV SLIKEDTRID QLNYAAIWQP HYNTCIANIG LTVSGGEREQ AAVREDIIRI 360
  361 IQKTVGSIFG AGVQPKWEIS VDIQRA

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

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Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

No functions predicted.

Term	Confidence	Notes
cation transmembrane transporter activity	6.3253503604398	bayes_pls_golite062009
ion transmembrane transporter activity	6.22189384650962	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	5.82185991246167	bayes_pls_golite062009
transporter activity	4.27173462293249	bayes_pls_golite062009
transmembrane transporter activity	4.18558383943492	bayes_pls_golite062009
substrate-specific transporter activity	3.94511592355578	bayes_pls_golite062009
metal ion transmembrane transporter activity	2.43294134632841	bayes_pls_golite062009
transition metal ion transmembrane transporter activity	2.32644140472297	bayes_pls_golite062009
efflux transmembrane transporter activity	1.98656970252979	bayes_pls_golite062009
inorganic cation transmembrane transporter activity	1.95281540802467	bayes_pls_golite062009
binding	1.70389974039196	bayes_pls_golite062009
cation channel activity	1.55011961058299	bayes_pls_golite062009
di-, tri-valent inorganic cation transmembrane transporter activity	1.31663166812163	bayes_pls_golite062009
ion channel activity	1.01093555209783	bayes_pls_golite062009
passive transmembrane transporter activity	0.963824080292546	bayes_pls_golite062009
channel activity	0.963824080292546	bayes_pls_golite062009
substrate-specific channel activity	0.948079854416241	bayes_pls_golite062009
cadmium ion transmembrane transporter activity	0.661906409169955	bayes_pls_golite062009
active transmembrane transporter activity	0.490905558612378	bayes_pls_golite062009
iron ion transmembrane transporter activity	0.376948884172728	bayes_pls_golite062009
protein binding	0.311357063667067	bayes_pls_golite062009

Source: Reynolds et al. 2008. Manuscript submitted

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..87]	deduced	N/A	No confident structure predictions are available.
2	View Details	[88..386]	PSI-BLAST	48.69897	No description for 2qfiA was found.

Protein Overview: SPBC16E9.14c

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: