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Protein Overview: SPBC16E9.14c

General Information:
Name(s) found: SPBC16E9.14c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • membrane transporter [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 386 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    integral to membrane [IEA]
    cytosol [IDALink to PubMed article]
    Golgi membrane [IPILink to PubMed article]
    Biological Process: vesicle-mediated transport [IGILink to PubMed article]
    transmembrane transport [IEA]
    zinc ion transport [IGILink to PubMed article]
    cellular zinc ion homeostasis [IGILink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed article]
    zinc ion transmembrane transporter activity [IGILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQNHNIPTA IQIQNPINNN VSVTISDQLP KPSANNPNLL SVDTRPTHRK GHHHKHSLSH  60
   61 QYFLPPKNRQ PLEIPASYPI PTFKETFAIL TFPQKLKLTS SILFFLVAVG VLLSGDATIL 120
  121 LTLSCSLIVE GVLIIINVWR ETLDSFLVWR HTCLRYPFGM QQMELLVDFS FSILLIFLGM 180
  181 NLLKEPAEHA IEDWGNLHHA GDHEEETVHI HLTISLFASA IISGFALLLD HPSAHIRELN 240
  241 SRFFHGLTLV PSLILVLLLS LGYQVGSFLS HLLSLTIAVT ALVNGFSIAK SLALMLLLTY 300
  301 SNKEKVFECV SLIKEDTRID QLNYAAIWQP HYNTCIANIG LTVSGGEREQ AAVREDIIRI 360
  361 IQKTVGSIFG AGVQPKWEIS VDIQRA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..87] deduced N/A No confident structure predictions are available.
    2 View Details [88..386] PSI-BLAST 48.69897 No description for 2qfiA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • cation transmembrane transporter activity
    		•  6.3253503604398 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  6.22189384650962 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  5.82185991246167 bayes_pls_golite062009
  • transporter activity
    		•  4.27173462293249 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  4.18558383943492 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.94511592355578 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  2.43294134632841 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  2.32644140472297 bayes_pls_golite062009
  • efflux transmembrane transporter activity
    		•  1.98656970252979 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  1.95281540802467 bayes_pls_golite062009
  • binding
    		•  1.70389974039196 bayes_pls_golite062009
  • cation channel activity
    		•  1.55011961058299 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  1.31663166812163 bayes_pls_golite062009
  • ion channel activity
    		•  1.01093555209783 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  0.963824080292546 bayes_pls_golite062009
  • channel activity
    		•  0.963824080292546 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  0.948079854416241 bayes_pls_golite062009
  • cadmium ion transmembrane transporter activity
    		•  0.661906409169955 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.490905558612378 bayes_pls_golite062009
  • iron ion transmembrane transporter activity
    		•  0.376948884172728 bayes_pls_golite062009
  • protein binding
    		•  0.311357063667067 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle