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Protein Overview: raf2

General Information:
Name(s) found: raf2 / SPCC970.07c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • Rik1-associated factor Raf2 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 636 amino acids

    Gene Ontology:
    Cellular Component: mating-type region heterochromatin [TASLink to PubMed article]
    nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    CLRC ubiquitin ligase complex [IDALink to PubMed article]
    nuclear centromeric heterochromatin [ICLink to PubMed article]
    Biological Process: positive regulation of histone H3-K9 methylation [IMPLink to PubMed article]
    chromatin silencing at centromere [IMPLink to PubMed article]
    negative regulation of histone H3-K4 methylation [IMPLink to PubMed article]
    regulation of mating type switching [IMPLink to PubMed article]
    meiotic chromosome segregation [IMPLink to PubMed article]
    mitotic sister chromatid segregation [IMPLink to PubMed article]
    chromatin silencing at silent mating-type cassette [IMPLink to PubMed article]
    chromatin silencing at telomere [IMPLink to PubMed article]
    meiotic sister chromatid cohesion, centromeric [IMPLink to PubMed article]
    cellular protein localization [IGILink to PubMed article]
    chromatin silencing by small RNA [IMPLink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPVRAEKKR KTDLIEQVCV TNKAGELVDL EDVLEYGPYS LTGILSSEKD EQEPLFDESI  60
   61 VLGYSIKISP VWTYNLKDVP EKETMSIWIV TPQRRYGILS PSSEYKAIYE QISEKNRLFY 120
  121 LIKTKFKDDM ISGTLEDYDN YIEVLKEKLE LPSCFQAILL VQKHIRFLLT QMVATSSLHV 180
  181 WSESPFFIRI RSSYEHLILQ INKNIYNARQ ERKKSKLSSN NPSDNNTTMK SSLNQALTLI 240
  241 NLPEQPFSIS SPTATPQLGV VKRTSPLRFP LNDIWLSGLR IVDPNIESIS LWKRIQVSTS 300
  301 PKHQRYISLQ EVCSVIAQQL QITNLEALNK LSSHGETLLQ IMHTAFTWRG TKLFNDIKHA 360
  361 IGFRSSVQQA RSQFRGYCYD YLFMHCNNGE KTSLHLLRTL ICMKLDFSNA QLAAKILFHF 420
  421 LLFDIGSGLS GSDYTYEQYI NHSAVAFSFT EEIFEKNFVT VLPDFVKLFS ISFGYWPAFS 480
  481 FYDELLKLLR NKYPKVYSST PNLCDQVWLD RTNLFPCNRS TRSTLPYRPT KLLDLASASS 540
  541 CLSKKETDFK QDTGLYSYNL EKVEALKVSP DLQTGIWSCP VQNCLYFAVC DNPYKPSQVI 600
  601 YDHLLGHVDS KFIFKTPSNS VRSFTNKLEH IMYNIN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..251] deduced N/A No confident structure predictions are available.
    2 View Details [252..430] deduced N/A No confident structure predictions are available.
    3 View Details [431..636] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle